Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.25□□□□□ -0.13
THBS1P07996 TIMM17BP1-201ENST00000545713 516 ntBASIC14.25□□□□□ -0.13
THBS1P07996 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
THBS1P07996 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.25□□□□□ -0.13
THBS1P07996 AP000845.1-201ENST00000581677 2131 ntBASIC14.25□□□□□ -0.13
THBS1P07996 AC138761.1-201ENST00000584393 385 ntBASIC14.25□□□□□ -0.13
THBS1P07996 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
THBS1P07996 AL590560.3-201ENST00000623350 461 ntBASIC14.25□□□□□ -0.13
THBS1P07996 AC004461.2-201ENST00000629517 803 ntBASIC14.25□□□□□ -0.13
THBS1P07996 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
THBS1P07996 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
THBS1P07996 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
THBS1P07996 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.25□□□□□ -0.13
THBS1P07996 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
THBS1P07996 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
THBS1P07996 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
THBS1P07996 ACE3P-201ENST00000423435 1973 ntBASIC14.25□□□□□ -0.13
THBS1P07996 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
THBS1P07996 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
THBS1P07996 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
THBS1P07996 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.25□□□□□ -0.13
THBS1P07996 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
THBS1P07996 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
THBS1P07996 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
THBS1P07996 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
THBS1P07996 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
THBS1P07996 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
THBS1P07996 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
THBS1P07996 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.24□□□□□ -0.13
THBS1P07996 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
THBS1P07996 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.24□□□□□ -0.13
THBS1P07996 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
THBS1P07996 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
THBS1P07996 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.24□□□□□ -0.13
THBS1P07996 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.24□□□□□ -0.13
THBS1P07996 TREML5P-201ENST00000421694 576 ntBASIC14.24□□□□□ -0.13
THBS1P07996 AC241585.1-201ENST00000433527 519 ntBASIC14.24□□□□□ -0.13
THBS1P07996 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
THBS1P07996 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.24□□□□□ -0.13
THBS1P07996 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.24□□□□□ -0.13
THBS1P07996 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.24□□□□□ -0.13
THBS1P07996 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
THBS1P07996 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.24□□□□□ -0.13
THBS1P07996 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
THBS1P07996 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
THBS1P07996 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
THBS1P07996 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.24□□□□□ -0.13
THBS1P07996 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.24□□□□□ -0.13
THBS1P07996 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.24□□□□□ -0.13
THBS1P07996 AC007292.2-201ENST00000593524 1812 ntBASIC14.24□□□□□ -0.13
THBS1P07996 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.24□□□□□ -0.13
THBS1P07996 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
THBS1P07996 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.24□□□□□ -0.13
THBS1P07996 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.24□□□□□ -0.13
THBS1P07996 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS1P07996 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.24□□□□□ -0.13
THBS1P07996 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
THBS1P07996 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 REXO1L4P-201ENST00000605109 1937 ntBASIC14.23□□□□□ -0.13
THBS1P07996 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
THBS1P07996 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.23□□□□□ -0.13
THBS1P07996 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.23□□□□□ -0.13
THBS1P07996 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.23□□□□□ -0.13
THBS1P07996 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.23□□□□□ -0.13
THBS1P07996 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
THBS1P07996 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms