Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.53□□□□□ -0.24
SFTPBP07988 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SFTPBP07988 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
SFTPBP07988 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.53□□□□□ -0.24
SFTPBP07988 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.53□□□□□ -0.24
SFTPBP07988 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SFTPBP07988 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.53□□□□□ -0.24
SFTPBP07988 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.53□□□□□ -0.24
SFTPBP07988 AC139749.1-202ENST00000617529 3139 ntBASIC13.53□□□□□ -0.24
SFTPBP07988 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SFTPBP07988 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.52□□□□□ -0.24
SFTPBP07988 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SFTPBP07988 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
SFTPBP07988 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SFTPBP07988 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
SFTPBP07988 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
SFTPBP07988 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SFTPBP07988 AC026748.1-201ENST00000624349 3251 ntBASIC13.52□□□□□ -0.24
SFTPBP07988 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SFTPBP07988 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SFTPBP07988 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
SFTPBP07988 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SFTPBP07988 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SFTPBP07988 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SFTPBP07988 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.52□□□□□ -0.25
SFTPBP07988 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SFTPBP07988 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.52□□□□□ -0.25
SFTPBP07988 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
SFTPBP07988 CNN2P2-201ENST00000443536 909 ntBASIC13.52□□□□□ -0.25
SFTPBP07988 CNN2P3-201ENST00000450201 906 ntBASIC13.52□□□□□ -0.25
SFTPBP07988 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
SFTPBP07988 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.52□□□□□ -0.25
SFTPBP07988 ALG1L8P-201ENST00000533887 760 ntBASIC13.52□□□□□ -0.25
SFTPBP07988 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.52□□□□□ -0.25
SFTPBP07988 AL136317.3-201ENST00000618497 906 ntBASIC13.52□□□□□ -0.25
SFTPBP07988 AP001059.3-201ENST00000619053 235 ntBASIC13.52□□□□□ -0.25
SFTPBP07988 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
SFTPBP07988 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.52□□□□□ -0.25
SFTPBP07988 AC084121.4-201ENST00000641598 221 ntBASIC13.52□□□□□ -0.25
SFTPBP07988 AF228730.8-201ENST00000642140 221 ntBASIC13.52□□□□□ -0.25
SFTPBP07988 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
SFTPBP07988 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SFTPBP07988 AP3S2-216ENST00000617003 1561 ntBASIC13.52□□□□□ -0.25
SFTPBP07988 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.52□□□□□ -0.25
SFTPBP07988 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SFTPBP07988 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
SFTPBP07988 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SFTPBP07988 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SFTPBP07988 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SFTPBP07988 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SFTPBP07988 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.52□□□□□ -0.25
SFTPBP07988 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SFTPBP07988 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
SFTPBP07988 AC023908.3-201ENST00000564211 3047 ntBASIC13.52□□□□□ -0.25
SFTPBP07988 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SFTPBP07988 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SFTPBP07988 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.52□□□□□ -0.25
SFTPBP07988 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SFTPBP07988 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SFTPBP07988 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SFTPBP07988 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SFTPBP07988 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SFTPBP07988 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SFTPBP07988 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SFTPBP07988 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SFTPBP07988 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
SFTPBP07988 C18orf15-201ENST00000623680 2534 ntBASIC13.51□□□□□ -0.25
SFTPBP07988 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SFTPBP07988 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SFTPBP07988 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.51□□□□□ -0.25
SFTPBP07988 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SFTPBP07988 AC112693.3-201ENST00000624819 1983 ntBASIC13.51□□□□□ -0.25
SFTPBP07988 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.51□□□□□ -0.25
SFTPBP07988 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SFTPBP07988 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SFTPBP07988 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SFTPBP07988 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.51□□□□□ -0.25
SFTPBP07988 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SFTPBP07988 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
SFTPBP07988 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SFTPBP07988 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SFTPBP07988 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SFTPBP07988 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SFTPBP07988 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SFTPBP07988 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SFTPBP07988 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SFTPBP07988 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.51□□□□□ -0.25
SFTPBP07988 AL139010.1-201ENST00000454878 894 ntBASIC13.51□□□□□ -0.25
SFTPBP07988 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SFTPBP07988 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.51□□□□□ -0.25
SFTPBP07988 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms