Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.8□□□□□ -0.2
CNOT4O95628 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CNOT4O95628 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.8□□□□□ -0.2
CNOT4O95628 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.79□□□□□ -0.2
CNOT4O95628 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CNOT4O95628 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.79□□□□□ -0.2
CNOT4O95628 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.79□□□□□ -0.2
CNOT4O95628 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 MIR1909-201ENST00000411312 80 ntBASIC13.79□□□□□ -0.2
CNOT4O95628 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.79□□□□□ -0.2
CNOT4O95628 ACA64.2-201ENST00000459014 129 ntBASIC13.79□□□□□ -0.2
CNOT4O95628 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.79□□□□□ -0.2
CNOT4O95628 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.79□□□□□ -0.2
CNOT4O95628 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.79□□□□□ -0.2
CNOT4O95628 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
CNOT4O95628 BRI3BPP1-201ENST00000594224 787 ntBASIC13.79□□□□□ -0.2
CNOT4O95628 AC008494.3-201ENST00000606615 944 ntBASIC13.79□□□□□ -0.2
CNOT4O95628 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.79□□□□□ -0.2
CNOT4O95628 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
CNOT4O95628 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.79□□□□□ -0.2
CNOT4O95628 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.79□□□□□ -0.2
CNOT4O95628 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.79□□□□□ -0.2
CNOT4O95628 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNOT4O95628 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CNOT4O95628 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.78□□□□□ -0.2
CNOT4O95628 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CNOT4O95628 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
CNOT4O95628 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
CNOT4O95628 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CNOT4O95628 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
CNOT4O95628 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.78□□□□□ -0.2
CNOT4O95628 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CNOT4O95628 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.78□□□□□ -0.2
CNOT4O95628 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.78□□□□□ -0.2
CNOT4O95628 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CNOT4O95628 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.78□□□□□ -0.2
CNOT4O95628 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.78□□□□□ -0.2
CNOT4O95628 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CNOT4O95628 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.78□□□□□ -0.2
CNOT4O95628 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.78□□□□□ -0.2
CNOT4O95628 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.78□□□□□ -0.2
CNOT4O95628 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CNOT4O95628 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.78□□□□□ -0.2
CNOT4O95628 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 CLK3P2-201ENST00000427566 1453 ntBASIC13.78□□□□□ -0.2
CNOT4O95628 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.78□□□□□ -0.2
CNOT4O95628 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNOT4O95628 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CNOT4O95628 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.78□□□□□ -0.2
CNOT4O95628 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms