Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC19.95■□□□□ 0.78
LTN1O94822 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC19.95■□□□□ 0.78
LTN1O94822 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC19.95■□□□□ 0.78
LTN1O94822 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTN1O94822 REXO1L2P-201ENST00000425429 2069 ntBASIC19.95■□□□□ 0.78
LTN1O94822 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
LTN1O94822 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC19.95■□□□□ 0.78
LTN1O94822 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LTN1O94822 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LTN1O94822 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LTN1O94822 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC19.94■□□□□ 0.78
LTN1O94822 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.94■□□□□ 0.78
LTN1O94822 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
LTN1O94822 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC19.94■□□□□ 0.78
LTN1O94822 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LTN1O94822 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LTN1O94822 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC19.94■□□□□ 0.78
LTN1O94822 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LTN1O94822 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC19.94■□□□□ 0.78
LTN1O94822 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LTN1O94822 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LTN1O94822 AC006335.1-201ENST00000445200 547 ntBASIC19.94■□□□□ 0.78
LTN1O94822 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC19.94■□□□□ 0.78
LTN1O94822 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC19.94■□□□□ 0.78
LTN1O94822 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC19.94■□□□□ 0.78
LTN1O94822 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC19.94■□□□□ 0.78
LTN1O94822 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC19.94■□□□□ 0.78
LTN1O94822 AL353770.1-201ENST00000614915 403 ntBASIC19.94■□□□□ 0.78
LTN1O94822 NAP1L6-202ENST00000641404 1222 ntBASIC19.94■□□□□ 0.78
LTN1O94822 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LTN1O94822 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LTN1O94822 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LTN1O94822 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC19.94■□□□□ 0.78
LTN1O94822 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC19.94■□□□□ 0.78
LTN1O94822 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LTN1O94822 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.94■□□□□ 0.78
LTN1O94822 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC19.94■□□□□ 0.78
LTN1O94822 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LTN1O94822 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LTN1O94822 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LTN1O94822 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LTN1O94822 AC020763.4-201ENST00000623414 4170 ntBASIC19.94■□□□□ 0.78
LTN1O94822 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LTN1O94822 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LTN1O94822 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LTN1O94822 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LTN1O94822 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
LTN1O94822 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LTN1O94822 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LTN1O94822 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC19.93■□□□□ 0.78
LTN1O94822 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LTN1O94822 RN7SL163P-201ENST00000583100 276 ntBASIC19.93■□□□□ 0.78
LTN1O94822 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC19.93■□□□□ 0.78
LTN1O94822 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LTN1O94822 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC19.93■□□□□ 0.78
LTN1O94822 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LTN1O94822 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LTN1O94822 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LTN1O94822 ZBED1P1-201ENST00000502364 1930 ntBASIC19.93■□□□□ 0.78
LTN1O94822 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LTN1O94822 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LTN1O94822 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LTN1O94822 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LTN1O94822 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LTN1O94822 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC19.93■□□□□ 0.78
LTN1O94822 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.93■□□□□ 0.78
LTN1O94822 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LTN1O94822 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LTN1O94822 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LTN1O94822 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LTN1O94822 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LTN1O94822 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC19.93■□□□□ 0.78
LTN1O94822 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC19.93■□□□□ 0.78
LTN1O94822 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC19.93■□□□□ 0.78
LTN1O94822 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
LTN1O94822 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.93■□□□□ 0.78
LTN1O94822 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
LTN1O94822 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LTN1O94822 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LTN1O94822 TBC1D3J-201ENST00000620719 1426 ntBASIC19.92■□□□□ 0.78
LTN1O94822 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LTN1O94822 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
LTN1O94822 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LTN1O94822 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LTN1O94822 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC19.92■□□□□ 0.78
LTN1O94822 RNA5SP359-201ENST00000364838 113 ntBASIC19.92■□□□□ 0.78
LTN1O94822 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LTN1O94822 NOC2LP1-201ENST00000450578 752 ntBASIC19.92■□□□□ 0.78
LTN1O94822 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC19.92■□□□□ 0.78
LTN1O94822 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC19.92■□□□□ 0.78
LTN1O94822 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC19.92■□□□□ 0.78
LTN1O94822 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LTN1O94822 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LTN1O94822 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC19.92■□□□□ 0.78
LTN1O94822 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
LTN1O94822 AC138894.2-201ENST00000602838 371 ntBASIC19.92■□□□□ 0.78
LTN1O94822 MIR6720-201ENST00000611664 98 ntBASIC19.92■□□□□ 0.78
LTN1O94822 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC19.92■□□□□ 0.78
LTN1O94822 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.92■□□□□ 0.78
LTN1O94822 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms