Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
UPK1BO75841 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
UPK1BO75841 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
UPK1BO75841 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.47□□□□□ -0.25
UPK1BO75841 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.47□□□□□ -0.25
UPK1BO75841 GHSR-202ENST00000427970 912 ntBASIC13.47□□□□□ -0.25
UPK1BO75841 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.47□□□□□ -0.25
UPK1BO75841 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.47□□□□□ -0.25
UPK1BO75841 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.47□□□□□ -0.25
UPK1BO75841 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
UPK1BO75841 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.47□□□□□ -0.25
UPK1BO75841 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.47□□□□□ -0.25
UPK1BO75841 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.47□□□□□ -0.25
UPK1BO75841 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.47□□□□□ -0.25
UPK1BO75841 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.47□□□□□ -0.25
UPK1BO75841 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
UPK1BO75841 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.47□□□□□ -0.25
UPK1BO75841 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.47□□□□□ -0.25
UPK1BO75841 NSUN5P2-203ENST00000457352 1529 ntBASIC13.47□□□□□ -0.25
UPK1BO75841 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.47□□□□□ -0.25
UPK1BO75841 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.47□□□□□ -0.25
UPK1BO75841 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
UPK1BO75841 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UPK1BO75841 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
UPK1BO75841 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UPK1BO75841 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.46□□□□□ -0.25
UPK1BO75841 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.46□□□□□ -0.25
UPK1BO75841 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
UPK1BO75841 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
UPK1BO75841 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.46□□□□□ -0.25
UPK1BO75841 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.46□□□□□ -0.25
UPK1BO75841 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
UPK1BO75841 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.46□□□□□ -0.25
UPK1BO75841 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.46□□□□□ -0.25
UPK1BO75841 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.46□□□□□ -0.25
UPK1BO75841 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
UPK1BO75841 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
UPK1BO75841 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UPK1BO75841 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
UPK1BO75841 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UPK1BO75841 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
UPK1BO75841 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
UPK1BO75841 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UPK1BO75841 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
UPK1BO75841 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
UPK1BO75841 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
UPK1BO75841 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.46□□□□□ -0.25
UPK1BO75841 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
UPK1BO75841 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
UPK1BO75841 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
UPK1BO75841 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
UPK1BO75841 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
UPK1BO75841 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.46□□□□□ -0.25
UPK1BO75841 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.46□□□□□ -0.25
UPK1BO75841 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.46□□□□□ -0.25
UPK1BO75841 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
UPK1BO75841 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
UPK1BO75841 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
UPK1BO75841 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
UPK1BO75841 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
UPK1BO75841 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
UPK1BO75841 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
UPK1BO75841 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
UPK1BO75841 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
UPK1BO75841 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
UPK1BO75841 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.45□□□□□ -0.26
UPK1BO75841 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UPK1BO75841 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.45□□□□□ -0.26
UPK1BO75841 AC129492.6-201ENST00000611383 1305 ntBASIC13.45□□□□□ -0.26
UPK1BO75841 AC012569.1-201ENST00000591191 1524 ntBASIC13.45□□□□□ -0.26
UPK1BO75841 AL589702.1-201ENST00000641229 1509 ntBASIC13.45□□□□□ -0.26
UPK1BO75841 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
UPK1BO75841 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UPK1BO75841 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
UPK1BO75841 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UPK1BO75841 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UPK1BO75841 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UPK1BO75841 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.45□□□□□ -0.26
UPK1BO75841 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.45□□□□□ -0.26
UPK1BO75841 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
UPK1BO75841 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
UPK1BO75841 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UPK1BO75841 RCN1P2-201ENST00000398357 915 ntBASIC13.45□□□□□ -0.26
UPK1BO75841 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms