Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.72■□□□□ 0.11
CLDN11O75508 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN11O75508 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN11O75508 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN11O75508 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN11O75508 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN11O75508 AC022532.1-201ENST00000624563 1728 ntBASIC15.71■□□□□ 0.11
CLDN11O75508 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.71■□□□□ 0.11
CLDN11O75508 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CLDN11O75508 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.71■□□□□ 0.11
CLDN11O75508 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN11O75508 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN11O75508 KRT8P14-201ENST00000414254 1442 ntBASIC15.71■□□□□ 0.11
CLDN11O75508 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN11O75508 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN11O75508 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN11O75508 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN11O75508 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN11O75508 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN11O75508 OR8S1-201ENST00000310194 1080 ntBASIC15.71■□□□□ 0.11
CLDN11O75508 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN11O75508 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CLDN11O75508 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CLDN11O75508 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN11O75508 GK-202ENST00000378941 458 ntTSL 3 BASIC15.71■□□□□ 0.11
CLDN11O75508 AC092933.1-201ENST00000393644 945 ntBASIC15.71■□□□□ 0.11
CLDN11O75508 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.71■□□□□ 0.11
CLDN11O75508 AC079776.1-201ENST00000401540 1152 ntBASIC15.71■□□□□ 0.11
CLDN11O75508 AC112492.5-201ENST00000421897 457 ntBASIC15.71■□□□□ 0.11
CLDN11O75508 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.71■□□□□ 0.11
CLDN11O75508 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CLDN11O75508 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN11O75508 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.71■□□□□ 0.11
CLDN11O75508 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN11O75508 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.71■□□□□ 0.11
CLDN11O75508 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN11O75508 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.71■□□□□ 0.11
CLDN11O75508 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CLDN11O75508 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.71■□□□□ 0.11
CLDN11O75508 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN11O75508 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN11O75508 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN11O75508 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN11O75508 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN11O75508 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN11O75508 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN11O75508 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
CLDN11O75508 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN11O75508 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN11O75508 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN11O75508 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CLDN11O75508 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CLDN11O75508 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN11O75508 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN11O75508 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN11O75508 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN11O75508 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN11O75508 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN11O75508 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN11O75508 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CLDN11O75508 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN11O75508 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN11O75508 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN11O75508 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN11O75508 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN11O75508 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CLDN11O75508 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN11O75508 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CLDN11O75508 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN11O75508 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN11O75508 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CLDN11O75508 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN11O75508 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN11O75508 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN11O75508 AC023024.2-201ENST00000623561 1993 ntBASIC15.7■□□□□ 0.1
CLDN11O75508 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN11O75508 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN11O75508 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.7■□□□□ 0.1
CLDN11O75508 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN11O75508 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CLDN11O75508 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CLDN11O75508 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.7■□□□□ 0.1
CLDN11O75508 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN11O75508 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN11O75508 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN11O75508 AC234783.1-201ENST00000441761 496 ntBASIC15.7■□□□□ 0.1
CLDN11O75508 AC106760.1-201ENST00000508690 800 ntBASIC15.7■□□□□ 0.1
CLDN11O75508 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CLDN11O75508 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN11O75508 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN11O75508 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN11O75508 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN11O75508 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CLDN11O75508 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN11O75508 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN11O75508 REXO1L4P-201ENST00000605109 1937 ntBASIC15.7■□□□□ 0.1
CLDN11O75508 PPT1-215ENST00000641471 2368 ntBASIC15.7■□□□□ 0.1
CLDN11O75508 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN11O75508 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN11O75508 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms