Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC24.05■■□□□ 1.44
CHD1O14646 AC063952.3-201ENST00000467756 308 ntBASIC24.05■■□□□ 1.44
CHD1O14646 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1O14646 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC24.05■■□□□ 1.44
CHD1O14646 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1O14646 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC24.05■■□□□ 1.44
CHD1O14646 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
CHD1O14646 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC24.05■■□□□ 1.44
CHD1O14646 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC24.05■■□□□ 1.44
CHD1O14646 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC24.05■■□□□ 1.44
CHD1O14646 TNRC18P3-201ENST00000441896 2691 ntBASIC24.05■■□□□ 1.44
CHD1O14646 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1O14646 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1O14646 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1O14646 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1O14646 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1O14646 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1O14646 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
CHD1O14646 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC24.05■■□□□ 1.44
CHD1O14646 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1O14646 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
CHD1O14646 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1O14646 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1O14646 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC24.04■■□□□ 1.44
CHD1O14646 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CHD1O14646 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC24.04■■□□□ 1.44
CHD1O14646 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC24.04■■□□□ 1.44
CHD1O14646 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC24.04■■□□□ 1.44
CHD1O14646 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC24.04■■□□□ 1.44
CHD1O14646 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC24.04■■□□□ 1.44
CHD1O14646 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHD1O14646 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHD1O14646 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC24.04■■□□□ 1.44
CHD1O14646 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CHD1O14646 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CHD1O14646 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHD1O14646 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
CHD1O14646 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CHD1O14646 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
CHD1O14646 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
CHD1O14646 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC24.04■■□□□ 1.44
CHD1O14646 AF274858.1-201ENST00000406288 372 ntBASIC24.04■■□□□ 1.44
CHD1O14646 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC24.04■■□□□ 1.44
CHD1O14646 OR2A1-AS1-210ENST00000496968 531 ntBASIC24.04■■□□□ 1.44
CHD1O14646 AC008972.2-201ENST00000606587 494 ntBASIC24.04■■□□□ 1.44
CHD1O14646 ST5-261ENST00000626808 1071 ntTSL 5 BASIC24.04■■□□□ 1.44
CHD1O14646 MTHFR-217ENST00000641820 1569 ntBASIC24.04■■□□□ 1.44
CHD1O14646 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC24.03■■□□□ 1.44
CHD1O14646 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1O14646 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1O14646 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1O14646 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1O14646 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1O14646 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1O14646 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1O14646 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1O14646 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
CHD1O14646 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1O14646 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CHD1O14646 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
CHD1O14646 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC24.03■■□□□ 1.44
CHD1O14646 RN7SL23P-201ENST00000484055 275 ntBASIC24.03■■□□□ 1.44
CHD1O14646 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC24.03■■□□□ 1.44
CHD1O14646 AC018846.1-201ENST00000568231 183 ntBASIC24.03■■□□□ 1.44
CHD1O14646 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC24.03■■□□□ 1.44
CHD1O14646 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1O14646 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1O14646 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1O14646 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CHD1O14646 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1O14646 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1O14646 AC021305.1-201ENST00000520656 1514 ntBASIC24.03■■□□□ 1.44
CHD1O14646 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHD1O14646 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
CHD1O14646 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHD1O14646 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHD1O14646 PGR-209ENST00000617858 2816 ntTSL 5 BASIC24.02■■□□□ 1.44
CHD1O14646 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC24.02■■□□□ 1.44
CHD1O14646 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHD1O14646 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHD1O14646 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC24.02■■□□□ 1.44
CHD1O14646 PTPA-215ENST00000432124 567 ntTSL 4 BASIC24.02■■□□□ 1.44
CHD1O14646 RN7SL582P-201ENST00000491078 279 ntBASIC24.02■■□□□ 1.44
CHD1O14646 IGHEP2-201ENST00000519308 1256 ntBASIC24.02■■□□□ 1.44
CHD1O14646 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHD1O14646 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC24.02■■□□□ 1.44
CHD1O14646 AC226150.1-201ENST00000544259 466 ntBASIC24.02■■□□□ 1.44
CHD1O14646 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC24.02■■□□□ 1.44
CHD1O14646 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC24.02■■□□□ 1.44
CHD1O14646 AC020904.3-201ENST00000624199 442 ntBASIC24.02■■□□□ 1.44
CHD1O14646 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC24.02■■□□□ 1.44
CHD1O14646 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHD1O14646 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC24.02■■□□□ 1.44
CHD1O14646 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHD1O14646 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHD1O14646 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC24.01■■□□□ 1.43
CHD1O14646 AC092862.1-201ENST00000541534 533 ntBASIC24.01■■□□□ 1.43
CHD1O14646 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC24.01■■□□□ 1.43
CHD1O14646 AL590235.1-201ENST00000564650 861 ntBASIC24.01■■□□□ 1.43
CHD1O14646 NAV1-210ENST00000593583 726 ntBASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms