Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CLIC1O00299 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CLIC1O00299 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CLIC1O00299 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.61□□□□□ -0.07
CLIC1O00299 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.6□□□□□ -0.07
CLIC1O00299 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.6□□□□□ -0.07
CLIC1O00299 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CLIC1O00299 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
CLIC1O00299 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLIC1O00299 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLIC1O00299 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.6□□□□□ -0.07
CLIC1O00299 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLIC1O00299 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CLIC1O00299 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLIC1O00299 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLIC1O00299 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLIC1O00299 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CLIC1O00299 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CLIC1O00299 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.6□□□□□ -0.07
CLIC1O00299 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.6□□□□□ -0.07
CLIC1O00299 DNAJB3-201ENST00000446806 729 ntBASIC14.6□□□□□ -0.07
CLIC1O00299 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLIC1O00299 YBX1P5-201ENST00000509441 847 ntBASIC14.6□□□□□ -0.07
CLIC1O00299 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.6□□□□□ -0.07
CLIC1O00299 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.6□□□□□ -0.07
CLIC1O00299 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLIC1O00299 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.6□□□□□ -0.07
CLIC1O00299 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.6□□□□□ -0.07
CLIC1O00299 MIR4453-201ENST00000584019 89 ntBASIC14.6□□□□□ -0.07
CLIC1O00299 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.6□□□□□ -0.07
CLIC1O00299 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLIC1O00299 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.6□□□□□ -0.07
CLIC1O00299 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.6□□□□□ -0.07
CLIC1O00299 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.6□□□□□ -0.07
CLIC1O00299 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.6□□□□□ -0.07
CLIC1O00299 INTS4P1-203ENST00000641008 3683 ntBASIC14.6□□□□□ -0.07
CLIC1O00299 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLIC1O00299 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLIC1O00299 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
CLIC1O00299 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLIC1O00299 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLIC1O00299 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLIC1O00299 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLIC1O00299 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CLIC1O00299 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.6□□□□□ -0.07
CLIC1O00299 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLIC1O00299 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLIC1O00299 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
CLIC1O00299 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLIC1O00299 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.6□□□□□ -0.07
CLIC1O00299 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.6□□□□□ -0.07
CLIC1O00299 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.6□□□□□ -0.07
CLIC1O00299 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLIC1O00299 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.6□□□□□ -0.07
CLIC1O00299 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLIC1O00299 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC1O00299 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CLIC1O00299 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC1O00299 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC1O00299 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC1O00299 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CLIC1O00299 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.59□□□□□ -0.07
CLIC1O00299 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC1O00299 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CLIC1O00299 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC1O00299 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC1O00299 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
CLIC1O00299 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.59□□□□□ -0.07
CLIC1O00299 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.59□□□□□ -0.07
CLIC1O00299 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC1O00299 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC1O00299 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC1O00299 AL133267.1-201ENST00000398220 340 ntBASIC14.59□□□□□ -0.07
CLIC1O00299 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CLIC1O00299 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.59□□□□□ -0.07
CLIC1O00299 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
CLIC1O00299 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
CLIC1O00299 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.59□□□□□ -0.07
CLIC1O00299 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLIC1O00299 AP000344.2-201ENST00000512987 629 ntBASIC14.59□□□□□ -0.07
CLIC1O00299 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.59□□□□□ -0.07
CLIC1O00299 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.59□□□□□ -0.07
CLIC1O00299 AC004835.2-201ENST00000603762 682 ntBASIC14.59□□□□□ -0.07
CLIC1O00299 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.59□□□□□ -0.07
CLIC1O00299 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
CLIC1O00299 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.59□□□□□ -0.07
CLIC1O00299 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms