Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TLR4O00206 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TLR4O00206 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TLR4O00206 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TLR4O00206 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TLR4O00206 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TLR4O00206 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TLR4O00206 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TLR4O00206 FLJ16779-201ENST00000612722 7638 ntBASIC15.3■□□□□ 0.04
TLR4O00206 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TLR4O00206 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TLR4O00206 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TLR4O00206 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TLR4O00206 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TLR4O00206 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TLR4O00206 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TLR4O00206 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TLR4O00206 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TLR4O00206 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TLR4O00206 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TLR4O00206 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.3■□□□□ 0.04
TLR4O00206 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TLR4O00206 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TLR4O00206 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TLR4O00206 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.3■□□□□ 0.04
TLR4O00206 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TLR4O00206 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TLR4O00206 RPL13AP20-201ENST00000459725 609 ntBASIC15.3■□□□□ 0.04
TLR4O00206 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.3■□□□□ 0.04
TLR4O00206 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.3■□□□□ 0.04
TLR4O00206 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TLR4O00206 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
TLR4O00206 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.3■□□□□ 0.04
TLR4O00206 RN7SL560P-201ENST00000577943 264 ntBASIC15.3■□□□□ 0.04
TLR4O00206 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TLR4O00206 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TLR4O00206 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.3■□□□□ 0.04
TLR4O00206 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.3■□□□□ 0.04
TLR4O00206 AL513477.1-201ENST00000602865 2407 ntBASIC15.3■□□□□ 0.04
TLR4O00206 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.3■□□□□ 0.04
TLR4O00206 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TLR4O00206 BX539320.1-201ENST00000623759 877 ntBASIC15.3■□□□□ 0.04
TLR4O00206 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.3■□□□□ 0.04
TLR4O00206 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TLR4O00206 AC068587.6-202ENST00000641839 5619 ntBASIC15.3■□□□□ 0.04
TLR4O00206 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TLR4O00206 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TLR4O00206 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TLR4O00206 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TLR4O00206 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TLR4O00206 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.29■□□□□ 0.04
TLR4O00206 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.29■□□□□ 0.04
TLR4O00206 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 AL603832.2-201ENST00000566195 2125 ntBASIC15.29■□□□□ 0.04
TLR4O00206 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
TLR4O00206 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TLR4O00206 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TLR4O00206 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.29■□□□□ 0.04
TLR4O00206 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.29■□□□□ 0.04
TLR4O00206 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.29■□□□□ 0.04
TLR4O00206 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.29■□□□□ 0.04
TLR4O00206 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.29■□□□□ 0.04
TLR4O00206 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.29■□□□□ 0.04
TLR4O00206 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.29■□□□□ 0.04
TLR4O00206 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.29■□□□□ 0.04
TLR4O00206 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.29■□□□□ 0.04
TLR4O00206 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.29■□□□□ 0.04
TLR4O00206 AC145423.3-201ENST00000615987 467 ntBASIC15.29■□□□□ 0.04
TLR4O00206 AC132938.4-201ENST00000623835 848 ntBASIC15.29■□□□□ 0.04
TLR4O00206 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TLR4O00206 AC104640.1-201ENST00000562617 2109 ntBASIC15.29■□□□□ 0.04
TLR4O00206 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 AC092384.3-202ENST00000564646 2873 ntBASIC15.29■□□□□ 0.04
TLR4O00206 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TLR4O00206 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms