Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 AC073389.1-201ENST00000595595 795 ntBASIC16.86■□□□□ 0.29
CCDC66A2RUB6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 AC005562.1-201ENST00000583030 3219 ntBASIC16.86■□□□□ 0.29
CCDC66A2RUB6 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 AC104109.2-201ENST00000602919 1418 ntBASIC16.86■□□□□ 0.29
CCDC66A2RUB6 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 AC105250.1-201ENST00000509378 2057 ntBASIC16.85■□□□□ 0.29
CCDC66A2RUB6 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 AC074386.1-202ENST00000463561 864 ntBASIC16.85■□□□□ 0.29
CCDC66A2RUB6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.85■□□□□ 0.29
CCDC66A2RUB6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC66A2RUB6 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 AC136759.1-202ENST00000530858 2194 ntBASIC16.84■□□□□ 0.29
CCDC66A2RUB6 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 AL590627.1-203ENST00000421194 1026 ntBASIC16.84■□□□□ 0.29
CCDC66A2RUB6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 AC098859.1-201ENST00000502915 1238 ntBASIC16.84■□□□□ 0.29
CCDC66A2RUB6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 PDPK2P-202ENST00000562415 1191 ntBASIC16.84■□□□□ 0.29
CCDC66A2RUB6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 AC024267.1-201ENST00000582320 895 ntBASIC16.84■□□□□ 0.29
CCDC66A2RUB6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms