Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 RN7SL510P-201ENST00000581311 263 ntBASIC13.47□□□□□ -0.25
SHISA3A0PJX4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 AL359183.1-201ENST00000623796 2132 ntBASIC13.47□□□□□ -0.25
SHISA3A0PJX4 AC008267.7-201ENST00000624570 1194 ntBASIC13.47□□□□□ -0.25
SHISA3A0PJX4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 OR2I1P-210ENST00000642037 4691 ntBASIC13.47□□□□□ -0.25
SHISA3A0PJX4 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 AL031008.1-201ENST00000619963 541 ntBASIC13.46□□□□□ -0.25
SHISA3A0PJX4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 AC012508.2-201ENST00000567613 1472 ntBASIC13.46□□□□□ -0.25
SHISA3A0PJX4 AC027612.1-201ENST00000445234 2395 ntBASIC13.46□□□□□ -0.25
SHISA3A0PJX4 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.46□□□□□ -0.25
SHISA3A0PJX4 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.46□□□□□ -0.26
SHISA3A0PJX4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
SHISA3A0PJX4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SHISA3A0PJX4 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SHISA3A0PJX4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SHISA3A0PJX4 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
SHISA3A0PJX4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SHISA3A0PJX4 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SHISA3A0PJX4 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SHISA3A0PJX4 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.46□□□□□ -0.26
SHISA3A0PJX4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.26
SHISA3A0PJX4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.46□□□□□ -0.26
SHISA3A0PJX4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SHISA3A0PJX4 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.46□□□□□ -0.26
SHISA3A0PJX4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.46□□□□□ -0.26
SHISA3A0PJX4 AL161772.1-201ENST00000610494 4412 ntBASIC13.46□□□□□ -0.26
SHISA3A0PJX4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SHISA3A0PJX4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.46□□□□□ -0.26
SHISA3A0PJX4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 AC055811.4-201ENST00000624039 1754 ntBASIC13.45□□□□□ -0.26
SHISA3A0PJX4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 PCDHA3-202ENST00000532566 4594 ntBASIC13.45□□□□□ -0.26
SHISA3A0PJX4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 AC130686.1-201ENST00000622936 2466 ntBASIC13.45□□□□□ -0.26
SHISA3A0PJX4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 AC002056.1-201ENST00000395613 760 ntBASIC13.45□□□□□ -0.26
SHISA3A0PJX4 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms