Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC097376.2-205ENST00000610159 5334 ntBASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CYP4F24P-201ENST00000586049 1580 ntBASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FO393414.2-201ENST00000405153 598 ntBASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 MEP1AP4-201ENST00000423244 1087 ntBASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC004461.2-201ENST00000629517 803 ntBASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AL691432.1-201ENST00000596308 1422 ntBASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CU639417.3-201ENST00000624240 1404 ntBASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms