Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
A0A1W2PRF3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
A0A1W2PRF3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
A0A1W2PRF3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
A0A1W2PRF3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
A0A1W2PRF3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.77□□□□□ -0.36
A0A1W2PRF3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
A0A1W2PRF3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
A0A1W2PRF3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
A0A1W2PRF3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
A0A1W2PRF3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
A0A1W2PRF3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
A0A1W2PRF3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.77□□□□□ -0.36
A0A1W2PRF3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.77□□□□□ -0.36
A0A1W2PRF3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
A0A1W2PRF3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.77□□□□□ -0.36
A0A1W2PRF3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
A0A1W2PRF3 AC007950.2-201ENST00000615045 2347 ntBASIC12.77□□□□□ -0.36
A0A1W2PRF3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
A0A1W2PRF3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
A0A1W2PRF3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
A0A1W2PRF3 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
A0A1W2PRF3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
A0A1W2PRF3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
A0A1W2PRF3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.77□□□□□ -0.37
A0A1W2PRF3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.77□□□□□ -0.37
A0A1W2PRF3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.77□□□□□ -0.37
A0A1W2PRF3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.77□□□□□ -0.37
A0A1W2PRF3 INE1-201ENST00000456273 945 ntBASIC12.77□□□□□ -0.37
A0A1W2PRF3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.77□□□□□ -0.37
A0A1W2PRF3 FAM86LP-201ENST00000478302 853 ntBASIC12.77□□□□□ -0.37
A0A1W2PRF3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
A0A1W2PRF3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.77□□□□□ -0.37
A0A1W2PRF3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
A0A1W2PRF3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.77□□□□□ -0.37
A0A1W2PRF3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
A0A1W2PRF3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
A0A1W2PRF3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
A0A1W2PRF3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.77□□□□□ -0.37
A0A1W2PRF3 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
A0A1W2PRF3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.77□□□□□ -0.37
A0A1W2PRF3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
A0A1W2PRF3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
A0A1W2PRF3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
A0A1W2PRF3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
A0A1W2PRF3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
A0A1W2PRF3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
A0A1W2PRF3 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
A0A1W2PRF3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.77□□□□□ -0.37
A0A1W2PRF3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
A0A1W2PRF3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
A0A1W2PRF3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
A0A1W2PRF3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.77□□□□□ -0.37
A0A1W2PRF3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.76□□□□□ -0.37
A0A1W2PRF3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.76□□□□□ -0.37
A0A1W2PRF3 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.76□□□□□ -0.37
A0A1W2PRF3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.76□□□□□ -0.37
A0A1W2PRF3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
A0A1W2PRF3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.76□□□□□ -0.37
A0A1W2PRF3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.76□□□□□ -0.37
A0A1W2PRF3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.76□□□□□ -0.37
A0A1W2PRF3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.76□□□□□ -0.37
A0A1W2PRF3 AC132938.2-201ENST00000579188 680 ntBASIC12.76□□□□□ -0.37
A0A1W2PRF3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.76□□□□□ -0.37
A0A1W2PRF3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 WFDC1-204ENST00000613603 549 ntBASIC12.76□□□□□ -0.37
A0A1W2PRF3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.76□□□□□ -0.37
A0A1W2PRF3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
A0A1W2PRF3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.76□□□□□ -0.37
A0A1W2PRF3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.76□□□□□ -0.37
A0A1W2PRF3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
A0A1W2PRF3 AL591163.1-201ENST00000641757 987 ntBASIC12.76□□□□□ -0.37
A0A1W2PRF3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
A0A1W2PRF3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
A0A1W2PRF3 AL121723.1-201ENST00000445194 1519 ntBASIC12.76□□□□□ -0.37
A0A1W2PRF3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.76□□□□□ -0.37
A0A1W2PRF3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
A0A1W2PRF3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
A0A1W2PRF3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms