Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 DBET-201ENST00000630918 3363 ntBASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 KLF2P2-201ENST00000416807 1039 ntBASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 ACTG1P3-201ENST00000431775 1114 ntBASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 AC114812.1-204ENST00000449669 728 ntBASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 AP005018.1-201ENST00000525475 301 ntBASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 AL596325.1-201ENST00000563991 1082 ntBASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 AJ011931.1-201ENST00000618749 2492 ntBASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
TRBV5-4A0A0C4DH59 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 ACTBP8-201ENST00000403258 1108 ntBASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 AC093433.1-201ENST00000458048 571 ntBASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 AC009486.1-201ENST00000569860 813 ntBASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRBV5-4A0A0C4DH59 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV5-4A0A0C4DH59 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-4A0A0C4DH59 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-4A0A0C4DH59 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-4A0A0C4DH59 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-4A0A0C4DH59 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV5-4A0A0C4DH59 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-4A0A0C4DH59 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRBV5-4A0A0C4DH59 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRBV5-4A0A0C4DH59 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-4A0A0C4DH59 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV5-4A0A0C4DH59 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV5-4A0A0C4DH59 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRBV5-4A0A0C4DH59 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-4A0A0C4DH59 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV5-4A0A0C4DH59 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.1■□□□□ 0.01
TRBV5-4A0A0C4DH59 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.1■□□□□ 0.01
TRBV5-4A0A0C4DH59 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV5-4A0A0C4DH59 RN7SL692P-201ENST00000464677 288 ntBASIC15.1■□□□□ 0.01
TRBV5-4A0A0C4DH59 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRBV5-4A0A0C4DH59 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRBV5-4A0A0C4DH59 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms