Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 AC009477.1-201ENST00000452936 217 ntBASIC17.64■□□□□ 0.41
CLIC4Q9Y696 AC067863.1-201ENST00000494933 530 ntBASIC17.64■□□□□ 0.41
CLIC4Q9Y696 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 AC139530.3-201ENST00000620344 690 ntBASIC17.64■□□□□ 0.41
CLIC4Q9Y696 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 KRT18P28-201ENST00000453838 1332 ntBASIC17.64■□□□□ 0.41
CLIC4Q9Y696 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLIC4Q9Y696 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 METTL21AP1-201ENST00000438852 635 ntBASIC17.63■□□□□ 0.41
CLIC4Q9Y696 AC114501.2-201ENST00000439631 535 ntBASIC17.63■□□□□ 0.41
CLIC4Q9Y696 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLIC4Q9Y696 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 AC026748.1-201ENST00000624349 3251 ntBASIC17.62■□□□□ 0.41
CLIC4Q9Y696 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 FAM8A3P-201ENST00000427218 844 ntBASIC17.62■□□□□ 0.41
CLIC4Q9Y696 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 AC092337.1-201ENST00000568699 1129 ntBASIC17.62■□□□□ 0.41
CLIC4Q9Y696 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 AC000095.1-201ENST00000603208 874 ntBASIC17.62■□□□□ 0.41
CLIC4Q9Y696 AL645728.2-202ENST00000641679 227 ntBASIC17.62■□□□□ 0.41
CLIC4Q9Y696 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CLIC4Q9Y696 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.62■□□□□ 0.41
CLIC4Q9Y696 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLIC4Q9Y696 AC007191.1-201ENST00000623179 2995 ntBASIC17.61■□□□□ 0.41
CLIC4Q9Y696 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLIC4Q9Y696 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CLIC4Q9Y696 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLIC4Q9Y696 AC005912.2-201ENST00000619492 2400 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms