Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 AC023090.2-201ENST00000625182 2110 ntBASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 AKR1C7P-201ENST00000305623 895 ntBASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 RBM17P3-201ENST00000417687 1192 ntBASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 AL031008.1-201ENST00000619963 541 ntBASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.78□□□□□ -0.04
LRCH1Q9Y2L9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 AC134407.2-201ENST00000625089 1978 ntBASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LRCH1Q9Y2L9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 AC087641.1-201ENST00000557561 1021 ntBASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRCH1Q9Y2L9 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms