Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSX2IPQ9Y2D8 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 AC092850.2-201ENST00000623821 2697 ntBASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 C2orf27AP3-201ENST00000434123 579 ntBASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 AL354718.3-201ENST00000616414 581 ntBASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 CR382287.1-201ENST00000623954 586 ntBASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 AC097376.2-205ENST00000610159 5334 ntBASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSX2IPQ9Y2D8 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 AC006449.6-201ENST00000612330 2296 ntBASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 YBX1P6-201ENST00000442962 1002 ntBASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 FTH1P14-201ENST00000482930 551 ntBASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms