Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PNMA3Q9UL41 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PNMA3Q9UL41 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.7■□□□□ 0.42
PNMA3Q9UL41 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PNMA3Q9UL41 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 KRT8P19-201ENST00000551916 1455 ntBASIC17.69■□□□□ 0.42
PNMA3Q9UL41 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 AL133466.1-201ENST00000447582 150 ntBASIC17.69■□□□□ 0.42
PNMA3Q9UL41 AC245884.6-201ENST00000515672 1067 ntBASIC17.69■□□□□ 0.42
PNMA3Q9UL41 AC022616.1-201ENST00000518688 554 ntBASIC17.69■□□□□ 0.42
PNMA3Q9UL41 AC044849.1-201ENST00000519737 1188 ntBASIC17.69■□□□□ 0.42
PNMA3Q9UL41 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.69■□□□□ 0.42
PNMA3Q9UL41 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 NKAIN1P1-201ENST00000435754 582 ntBASIC17.68■□□□□ 0.42
PNMA3Q9UL41 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 AKR1B10P2-201ENST00000577332 927 ntBASIC17.68■□□□□ 0.42
PNMA3Q9UL41 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA3Q9UL41 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.67■□□□□ 0.42
PNMA3Q9UL41 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms