Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRFN1Q9P244 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRFN1Q9P244 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRFN1Q9P244 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRFN1Q9P244 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LRFN1Q9P244 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRFN1Q9P244 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.21□□□□□ -0.13
LRFN1Q9P244 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.21□□□□□ -0.13
LRFN1Q9P244 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRFN1Q9P244 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRFN1Q9P244 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
LRFN1Q9P244 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
LRFN1Q9P244 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.21□□□□□ -0.14
LRFN1Q9P244 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LRFN1Q9P244 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LRFN1Q9P244 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.21□□□□□ -0.14
LRFN1Q9P244 PRAL-201ENST00000624952 3286 ntBASIC14.21□□□□□ -0.14
LRFN1Q9P244 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LRFN1Q9P244 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 AC092933.1-201ENST00000393644 945 ntBASIC14.2□□□□□ -0.14
LRFN1Q9P244 AC016694.1-201ENST00000434179 700 ntBASIC14.2□□□□□ -0.14
LRFN1Q9P244 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 AC022494.1-201ENST00000466044 728 ntBASIC14.2□□□□□ -0.14
LRFN1Q9P244 FTH1P14-201ENST00000482930 551 ntBASIC14.2□□□□□ -0.14
LRFN1Q9P244 AC022137.2-201ENST00000503482 481 ntBASIC14.2□□□□□ -0.14
LRFN1Q9P244 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 AC025181.2-201ENST00000606994 802 ntBASIC14.2□□□□□ -0.14
LRFN1Q9P244 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 AP005019.2-201ENST00000615104 511 ntBASIC14.2□□□□□ -0.14
LRFN1Q9P244 BX539320.1-201ENST00000623759 877 ntBASIC14.2□□□□□ -0.14
LRFN1Q9P244 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.2□□□□□ -0.14
LRFN1Q9P244 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRFN1Q9P244 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 C2orf27AP3-201ENST00000434123 579 ntBASIC14.19□□□□□ -0.14
LRFN1Q9P244 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRFN1Q9P244 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
LRFN1Q9P244 AC106760.1-201ENST00000508690 800 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms