Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 HLA-H-201ENST00000383620 1096 ntBASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 RPS8P6-201ENST00000426177 609 ntBASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 IGHV3-62-201ENST00000520057 340 ntBASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 KRT8P23-201ENST00000560090 1207 ntBASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 CICP8-201ENST00000455800 2813 ntBASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 LINC01101-201ENST00000622953 1884 ntBASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 KRT18P2-201ENST00000447938 1258 ntBASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 PHKG1P2-201ENST00000457537 863 ntBASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 AL135744.1-201ENST00000565098 629 ntBASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 AL138918.1-201ENST00000568306 659 ntBASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 KRT8P37-201ENST00000451609 1420 ntBASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCDHB16Q9NRJ7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PCDHB16Q9NRJ7 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms