Protein–RNA interactions for Protein: Q9NPA2

MMP25, Matrix metalloproteinase-25, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP25Q9NPA2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.36□□□□□ -0.11
MMP25Q9NPA2 AC134312.5-201ENST00000568031 1313 ntBASIC14.36□□□□□ -0.11
MMP25Q9NPA2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.36□□□□□ -0.11
MMP25Q9NPA2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP25Q9NPA2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
MMP25Q9NPA2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.36□□□□□ -0.11
MMP25Q9NPA2 AC144831.1-201ENST00000573312 2656 ntBASIC14.36□□□□□ -0.11
MMP25Q9NPA2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MMP25Q9NPA2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
MMP25Q9NPA2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
MMP25Q9NPA2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.36□□□□□ -0.11
MMP25Q9NPA2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MMP25Q9NPA2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MMP25Q9NPA2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.36□□□□□ -0.11
MMP25Q9NPA2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
MMP25Q9NPA2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 AC084364.1-201ENST00000551967 1556 ntBASIC14.35□□□□□ -0.11
MMP25Q9NPA2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 AC022137.2-201ENST00000503482 481 ntBASIC14.35□□□□□ -0.11
MMP25Q9NPA2 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 AP001582.1-201ENST00000525856 295 ntBASIC14.35□□□□□ -0.11
MMP25Q9NPA2 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 AP005019.2-201ENST00000615104 511 ntBASIC14.35□□□□□ -0.11
MMP25Q9NPA2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP25Q9NPA2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 AC009090.5-201ENST00000624886 2285 ntBASIC14.34□□□□□ -0.11
MMP25Q9NPA2 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 MIR1909-201ENST00000411312 80 ntBASIC14.34□□□□□ -0.11
MMP25Q9NPA2 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 BCRP2-202ENST00000447763 634 ntBASIC14.34□□□□□ -0.11
MMP25Q9NPA2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 BCRP6-201ENST00000510112 632 ntBASIC14.34□□□□□ -0.11
MMP25Q9NPA2 BCRP7-201ENST00000511549 544 ntBASIC14.34□□□□□ -0.11
MMP25Q9NPA2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 AP005482.1-201ENST00000563722 1273 ntBASIC14.34□□□□□ -0.11
MMP25Q9NPA2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 BX539320.1-201ENST00000623759 877 ntBASIC14.34□□□□□ -0.11
MMP25Q9NPA2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP25Q9NPA2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms