Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.26□□□□□ -0.29
GCM1Q9NP62 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 AC055876.2-201ENST00000531834 546 ntBASIC13.26□□□□□ -0.29
GCM1Q9NP62 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.26□□□□□ -0.29
GCM1Q9NP62 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 AL158212.4-201ENST00000624062 1286 ntBASIC13.26□□□□□ -0.29
GCM1Q9NP62 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
GCM1Q9NP62 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.25□□□□□ -0.29
GCM1Q9NP62 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
GCM1Q9NP62 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.25□□□□□ -0.29
GCM1Q9NP62 AC127383.1-201ENST00000444697 1800 ntBASIC13.25□□□□□ -0.29
GCM1Q9NP62 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
GCM1Q9NP62 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.25□□□□□ -0.29
GCM1Q9NP62 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GCM1Q9NP62 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GCM1Q9NP62 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.25□□□□□ -0.29
GCM1Q9NP62 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GCM1Q9NP62 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.25□□□□□ -0.29
GCM1Q9NP62 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GCM1Q9NP62 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GCM1Q9NP62 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
GCM1Q9NP62 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GCM1Q9NP62 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
GCM1Q9NP62 AC087499.6-201ENST00000411576 835 ntBASIC13.25□□□□□ -0.29
GCM1Q9NP62 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
GCM1Q9NP62 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
GCM1Q9NP62 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
GCM1Q9NP62 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.25□□□□□ -0.29
GCM1Q9NP62 AC190387.1-201ENST00000551683 408 ntBASIC13.25□□□□□ -0.29
GCM1Q9NP62 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.25□□□□□ -0.29
GCM1Q9NP62 RRP7BP-205ENST00000566851 833 ntBASIC13.25□□□□□ -0.29
GCM1Q9NP62 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.25□□□□□ -0.29
GCM1Q9NP62 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.25□□□□□ -0.29
GCM1Q9NP62 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.25□□□□□ -0.29
GCM1Q9NP62 AC099568.2-201ENST00000609194 695 ntBASIC13.25□□□□□ -0.29
GCM1Q9NP62 AL391069.4-201ENST00000609583 481 ntBASIC13.25□□□□□ -0.29
GCM1Q9NP62 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GCM1Q9NP62 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GCM1Q9NP62 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GCM1Q9NP62 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
GCM1Q9NP62 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.25□□□□□ -0.29
GCM1Q9NP62 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GCM1Q9NP62 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GCM1Q9NP62 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.25□□□□□ -0.29
GCM1Q9NP62 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GCM1Q9NP62 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.25□□□□□ -0.29
GCM1Q9NP62 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GCM1Q9NP62 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GCM1Q9NP62 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
GCM1Q9NP62 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.25□□□□□ -0.29
GCM1Q9NP62 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.25□□□□□ -0.29
GCM1Q9NP62 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GCM1Q9NP62 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.24□□□□□ -0.29
GCM1Q9NP62 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms