Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PIF1Q9H611 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PIF1Q9H611 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.87□□□□□ -0.03
PIF1Q9H611 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
PIF1Q9H611 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PIF1Q9H611 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.87□□□□□ -0.03
PIF1Q9H611 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PIF1Q9H611 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PIF1Q9H611 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.87□□□□□ -0.03
PIF1Q9H611 MROH4P-201ENST00000431302 1578 ntBASIC14.87□□□□□ -0.03
PIF1Q9H611 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.87□□□□□ -0.03
PIF1Q9H611 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
PIF1Q9H611 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PIF1Q9H611 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PIF1Q9H611 MCCD1P2-201ENST00000423228 335 ntBASIC14.87□□□□□ -0.03
PIF1Q9H611 AC004832.2-201ENST00000426397 482 ntBASIC14.87□□□□□ -0.03
PIF1Q9H611 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.87□□□□□ -0.03
PIF1Q9H611 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
PIF1Q9H611 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.87□□□□□ -0.03
PIF1Q9H611 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.87□□□□□ -0.03
PIF1Q9H611 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.87□□□□□ -0.03
PIF1Q9H611 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.87□□□□□ -0.03
PIF1Q9H611 PGAM5P1-201ENST00000518923 814 ntBASIC14.87□□□□□ -0.03
PIF1Q9H611 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.87□□□□□ -0.03
PIF1Q9H611 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.87□□□□□ -0.03
PIF1Q9H611 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.87□□□□□ -0.03
PIF1Q9H611 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.87□□□□□ -0.03
PIF1Q9H611 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PIF1Q9H611 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.87□□□□□ -0.03
PIF1Q9H611 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PIF1Q9H611 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.87□□□□□ -0.03
PIF1Q9H611 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
PIF1Q9H611 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PIF1Q9H611 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.87□□□□□ -0.03
PIF1Q9H611 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
PIF1Q9H611 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PIF1Q9H611 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PIF1Q9H611 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PIF1Q9H611 AC140479.7-201ENST00000636301 2332 ntBASIC14.87□□□□□ -0.03
PIF1Q9H611 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.87□□□□□ -0.03
PIF1Q9H611 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PIF1Q9H611 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PIF1Q9H611 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PIF1Q9H611 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.86□□□□□ -0.03
PIF1Q9H611 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.86□□□□□ -0.03
PIF1Q9H611 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 CYP4F24P-201ENST00000586049 1580 ntBASIC14.86□□□□□ -0.03
PIF1Q9H611 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.86□□□□□ -0.03
PIF1Q9H611 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
PIF1Q9H611 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.86□□□□□ -0.03
PIF1Q9H611 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.86□□□□□ -0.03
PIF1Q9H611 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.86□□□□□ -0.03
PIF1Q9H611 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PIF1Q9H611 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.86□□□□□ -0.03
PIF1Q9H611 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.86□□□□□ -0.03
PIF1Q9H611 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.86□□□□□ -0.03
PIF1Q9H611 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.86□□□□□ -0.03
PIF1Q9H611 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.86□□□□□ -0.03
PIF1Q9H611 AC112191.1-201ENST00000523689 701 ntBASIC14.86□□□□□ -0.03
PIF1Q9H611 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.86□□□□□ -0.03
PIF1Q9H611 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.86□□□□□ -0.03
PIF1Q9H611 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.86□□□□□ -0.03
PIF1Q9H611 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.86□□□□□ -0.03
PIF1Q9H611 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.86□□□□□ -0.03
PIF1Q9H611 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.86□□□□□ -0.03
PIF1Q9H611 AC092865.6-201ENST00000642101 219 ntBASIC14.86□□□□□ -0.03
PIF1Q9H611 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.86□□□□□ -0.03
PIF1Q9H611 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PIF1Q9H611 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PIF1Q9H611 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.86□□□□□ -0.03
PIF1Q9H611 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
PIF1Q9H611 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PIF1Q9H611 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.86□□□□□ -0.03
PIF1Q9H611 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
PIF1Q9H611 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.86□□□□□ -0.03
PIF1Q9H611 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PIF1Q9H611 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PIF1Q9H611 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms