Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 AL136317.3-201ENST00000618497 906 ntBASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 AC073592.8-201ENST00000624126 511 ntBASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 LINC01101-201ENST00000622953 1884 ntBASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 REXO1L2P-201ENST00000425429 2069 ntBASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF3BQ9BZI7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 AL009178.2-201ENST00000597278 2719 ntBASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 KLF2P3-201ENST00000451977 1087 ntBASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 RN7SL618P-201ENST00000477850 296 ntBASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 RNA5SP421-201ENST00000516864 134 ntBASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 AC068587.6-202ENST00000641839 5619 ntBASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
UPF3BQ9BZI7 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms