Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 AP003680.1-201ENST00000598970 3660 ntBASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 RPL5P21-201ENST00000404620 815 ntBASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 RN7SKP175-201ENST00000408472 289 ntBASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 AC125604.1-201ENST00000496255 707 ntBASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 AP000346.4-201ENST00000614827 381 ntBASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RTFDC1Q9BY42 AC009090.5-201ENST00000624886 2285 ntBASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 AC092127.1-201ENST00000567093 3455 ntBASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 RPL17P11-201ENST00000417593 544 ntBASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 AC006335.1-201ENST00000445200 547 ntBASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 AC234782.1-201ENST00000451950 919 ntBASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 HNRNPA1P36-201ENST00000521313 955 ntBASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 CENPX-208ENST00000584347 799 ntTSL 2 BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 AC006480.2-201ENST00000609770 1337 ntBASIC18.49■□□□□ 0.55
RTFDC1Q9BY42 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 AC010141.1-201ENST00000411585 623 ntBASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 GHSR-202ENST00000427970 912 ntBASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 AC103988.2-201ENST00000561804 725 ntBASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 AC090164.2-201ENST00000611487 516 ntBASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 MIR7845-201ENST00000618396 99 ntBASIC18.48■□□□□ 0.55
RTFDC1Q9BY42 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms