Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 AC051619.7-201ENST00000568314 623 ntBASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 AC025048.3-201ENST00000590609 569 ntBASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 AC138649.4-201ENST00000612222 287 ntBASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 AC005702.4-201ENST00000618393 416 ntBASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
YIPF4Q9BSR8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 CICP11-201ENST00000434745 2827 ntBASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 AC244107.1-201ENST00000442033 332 ntBASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 RN7SL618P-201ENST00000477850 296 ntBASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 LINC01115-203ENST00000606068 577 ntBASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 AL109936.8-201ENST00000641772 604 ntBASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 AC097376.2-205ENST00000610159 5334 ntBASIC14.62□□□□□ -0.07
YIPF4Q9BSR8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
YIPF4Q9BSR8 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
YIPF4Q9BSR8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.61□□□□□ -0.07
YIPF4Q9BSR8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
YIPF4Q9BSR8 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
YIPF4Q9BSR8 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
YIPF4Q9BSR8 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
YIPF4Q9BSR8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
YIPF4Q9BSR8 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
YIPF4Q9BSR8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
YIPF4Q9BSR8 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
YIPF4Q9BSR8 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
YIPF4Q9BSR8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.61□□□□□ -0.07
YIPF4Q9BSR8 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
YIPF4Q9BSR8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
YIPF4Q9BSR8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.61□□□□□ -0.07
YIPF4Q9BSR8 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.61□□□□□ -0.07
YIPF4Q9BSR8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
YIPF4Q9BSR8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
YIPF4Q9BSR8 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.61□□□□□ -0.07
YIPF4Q9BSR8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
YIPF4Q9BSR8 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms