Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 FAM8A3P-201ENST00000427218 844 ntBASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 RNA5SP410-201ENST00000516285 106 ntBASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 AC069120.2-201ENST00000524091 540 ntBASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 AC092364.2-202ENST00000597012 1073 ntBASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 AC015656.1-201ENST00000624209 3578 ntBASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 AC136759.1-202ENST00000530858 2194 ntBASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 AL365209.1-201ENST00000624418 6473 ntBASIC14.68□□□□□ -0.06
TUBA1CQ9BQE3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 AC005622.1-201ENST00000636801 1703 ntBASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 BASP1P1-201ENST00000430708 665 ntBASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 RNA5SP421-201ENST00000516864 134 ntBASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 AL158211.3-201ENST00000607385 239 ntBASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 AC007967.4-201ENST00000614700 386 ntBASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TUBA1CQ9BQE3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1CQ9BQE3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TUBA1CQ9BQE3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TUBA1CQ9BQE3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1CQ9BQE3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1CQ9BQE3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TUBA1CQ9BQE3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.66□□□□□ -0.06
TUBA1CQ9BQE3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
TUBA1CQ9BQE3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.66□□□□□ -0.06
TUBA1CQ9BQE3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.66□□□□□ -0.06
TUBA1CQ9BQE3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
TUBA1CQ9BQE3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1CQ9BQE3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.66□□□□□ -0.06
TUBA1CQ9BQE3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1CQ9BQE3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1CQ9BQE3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1CQ9BQE3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
TUBA1CQ9BQE3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1CQ9BQE3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TUBA1CQ9BQE3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms