Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.76□□□□□ -0.21
VRK1Q99986 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
VRK1Q99986 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VRK1Q99986 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.76□□□□□ -0.21
VRK1Q99986 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
VRK1Q99986 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VRK1Q99986 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.76□□□□□ -0.21
VRK1Q99986 PIN1P1-201ENST00000412108 996 ntBASIC13.76□□□□□ -0.21
VRK1Q99986 AL080243.2-201ENST00000418783 582 ntBASIC13.76□□□□□ -0.21
VRK1Q99986 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.76□□□□□ -0.21
VRK1Q99986 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.76□□□□□ -0.21
VRK1Q99986 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.76□□□□□ -0.21
VRK1Q99986 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.76□□□□□ -0.21
VRK1Q99986 AC135586.1-201ENST00000539323 574 ntBASIC13.76□□□□□ -0.21
VRK1Q99986 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.76□□□□□ -0.21
VRK1Q99986 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.76□□□□□ -0.21
VRK1Q99986 AC239800.4-201ENST00000603712 296 ntBASIC13.76□□□□□ -0.21
VRK1Q99986 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
VRK1Q99986 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.76□□□□□ -0.21
VRK1Q99986 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
VRK1Q99986 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 AC067750.1-201ENST00000608826 6545 ntBASIC13.76□□□□□ -0.21
VRK1Q99986 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
VRK1Q99986 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.76□□□□□ -0.21
VRK1Q99986 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
VRK1Q99986 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.76□□□□□ -0.21
VRK1Q99986 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.76□□□□□ -0.21
VRK1Q99986 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.76□□□□□ -0.21
VRK1Q99986 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VRK1Q99986 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
VRK1Q99986 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
VRK1Q99986 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
VRK1Q99986 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.75□□□□□ -0.21
VRK1Q99986 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.75□□□□□ -0.21
VRK1Q99986 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.75□□□□□ -0.21
VRK1Q99986 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
VRK1Q99986 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.75□□□□□ -0.21
VRK1Q99986 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.75□□□□□ -0.21
VRK1Q99986 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.75□□□□□ -0.21
VRK1Q99986 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.75□□□□□ -0.21
VRK1Q99986 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.75□□□□□ -0.21
VRK1Q99986 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.75□□□□□ -0.21
VRK1Q99986 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
VRK1Q99986 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.75□□□□□ -0.21
VRK1Q99986 MIR648-201ENST00000385046 94 ntBASIC13.75□□□□□ -0.21
VRK1Q99986 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.75□□□□□ -0.21
VRK1Q99986 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.75□□□□□ -0.21
VRK1Q99986 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.75□□□□□ -0.21
VRK1Q99986 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.75□□□□□ -0.21
VRK1Q99986 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.75□□□□□ -0.21
VRK1Q99986 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.75□□□□□ -0.21
VRK1Q99986 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
VRK1Q99986 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
VRK1Q99986 GRK6P1-201ENST00000400595 1711 ntBASIC13.75□□□□□ -0.21
VRK1Q99986 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
VRK1Q99986 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms