Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CDCA3Q99618 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.84■□□□□ 0.13
CDCA3Q99618 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CDCA3Q99618 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDCA3Q99618 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDCA3Q99618 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDCA3Q99618 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDCA3Q99618 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CDCA3Q99618 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.83■□□□□ 0.13
CDCA3Q99618 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CDCA3Q99618 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.83■□□□□ 0.13
CDCA3Q99618 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDCA3Q99618 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDCA3Q99618 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CDCA3Q99618 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDCA3Q99618 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDCA3Q99618 FGFR3P1-201ENST00000449999 601 ntBASIC15.83■□□□□ 0.12
CDCA3Q99618 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.83■□□□□ 0.12
CDCA3Q99618 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.83■□□□□ 0.12
CDCA3Q99618 NPM1P43-201ENST00000558669 786 ntBASIC15.83■□□□□ 0.12
CDCA3Q99618 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CDCA3Q99618 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.83■□□□□ 0.12
CDCA3Q99618 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.83■□□□□ 0.12
CDCA3Q99618 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CDCA3Q99618 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.83■□□□□ 0.12
CDCA3Q99618 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDCA3Q99618 RN7SL736P-201ENST00000613111 269 ntBASIC15.83■□□□□ 0.12
CDCA3Q99618 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDCA3Q99618 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.83■□□□□ 0.12
CDCA3Q99618 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDCA3Q99618 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDCA3Q99618 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.83■□□□□ 0.12
CDCA3Q99618 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDCA3Q99618 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDCA3Q99618 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.83■□□□□ 0.12
CDCA3Q99618 E2F3P2-201ENST00000447755 1422 ntBASIC15.83■□□□□ 0.12
CDCA3Q99618 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CDCA3Q99618 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDCA3Q99618 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDCA3Q99618 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDCA3Q99618 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDCA3Q99618 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CDCA3Q99618 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.82■□□□□ 0.12
CDCA3Q99618 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDCA3Q99618 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDCA3Q99618 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CDCA3Q99618 REXO1L5P-201ENST00000622260 2098 ntBASIC15.82■□□□□ 0.12
CDCA3Q99618 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.82■□□□□ 0.12
CDCA3Q99618 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.82■□□□□ 0.12
CDCA3Q99618 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDCA3Q99618 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.82■□□□□ 0.12
CDCA3Q99618 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.82■□□□□ 0.12
CDCA3Q99618 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.82■□□□□ 0.12
CDCA3Q99618 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.82■□□□□ 0.12
CDCA3Q99618 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.82■□□□□ 0.12
CDCA3Q99618 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.82■□□□□ 0.12
CDCA3Q99618 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.82■□□□□ 0.12
CDCA3Q99618 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.82■□□□□ 0.12
CDCA3Q99618 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.82■□□□□ 0.12
CDCA3Q99618 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CDCA3Q99618 AC132192.2-201ENST00000596206 1147 ntBASIC15.82■□□□□ 0.12
CDCA3Q99618 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.82■□□□□ 0.12
CDCA3Q99618 AC051619.9-201ENST00000623237 597 ntBASIC15.82■□□□□ 0.12
CDCA3Q99618 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.82■□□□□ 0.12
CDCA3Q99618 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.82■□□□□ 0.12
CDCA3Q99618 TBC1D3J-201ENST00000620719 1426 ntBASIC15.82■□□□□ 0.12
CDCA3Q99618 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDCA3Q99618 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CDCA3Q99618 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CDCA3Q99618 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.82■□□□□ 0.12
CDCA3Q99618 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.82■□□□□ 0.12
CDCA3Q99618 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CDCA3Q99618 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDCA3Q99618 AC011676.5-201ENST00000624864 2660 ntBASIC15.81■□□□□ 0.12
CDCA3Q99618 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDCA3Q99618 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms