Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.58■□□□□ 0.09
NDNQ99608 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.58■□□□□ 0.08
NDNQ99608 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDNQ99608 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDNQ99608 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDNQ99608 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDNQ99608 TSEN15P1-201ENST00000423257 515 ntBASIC15.58■□□□□ 0.08
NDNQ99608 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDNQ99608 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.58■□□□□ 0.08
NDNQ99608 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDNQ99608 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.58■□□□□ 0.08
NDNQ99608 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.58■□□□□ 0.08
NDNQ99608 AL512356.2-201ENST00000546955 174 ntBASIC15.58■□□□□ 0.08
NDNQ99608 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.58■□□□□ 0.08
NDNQ99608 SPDYE12P-201ENST00000618416 771 ntBASIC15.58■□□□□ 0.08
NDNQ99608 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.08
NDNQ99608 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.58■□□□□ 0.08
NDNQ99608 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
NDNQ99608 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
NDNQ99608 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NDNQ99608 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDNQ99608 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
NDNQ99608 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDNQ99608 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
NDNQ99608 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
NDNQ99608 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDNQ99608 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDNQ99608 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NDNQ99608 AL161772.1-201ENST00000610494 4412 ntBASIC15.58■□□□□ 0.08
NDNQ99608 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDNQ99608 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDNQ99608 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.58■□□□□ 0.08
NDNQ99608 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDNQ99608 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NDNQ99608 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.58■□□□□ 0.08
NDNQ99608 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NDNQ99608 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NDNQ99608 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NDNQ99608 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.57■□□□□ 0.08
NDNQ99608 AGAP7P-201ENST00000582299 2062 ntBASIC15.57■□□□□ 0.08
NDNQ99608 AGAP14-201ENST00000624701 2060 ntBASIC15.57■□□□□ 0.08
NDNQ99608 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NDNQ99608 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NDNQ99608 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
NDNQ99608 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.57■□□□□ 0.08
NDNQ99608 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.57■□□□□ 0.08
NDNQ99608 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.57■□□□□ 0.08
NDNQ99608 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 HLA-J-203ENST00000494367 1087 ntBASIC15.57■□□□□ 0.08
NDNQ99608 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.57■□□□□ 0.08
NDNQ99608 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.57■□□□□ 0.08
NDNQ99608 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.57■□□□□ 0.08
NDNQ99608 AL691403.2-201ENST00000618460 490 ntBASIC15.57■□□□□ 0.08
NDNQ99608 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NDNQ99608 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NDNQ99608 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.57■□□□□ 0.08
NDNQ99608 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NDNQ99608 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.57■□□□□ 0.08
NDNQ99608 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 CICP11-201ENST00000434745 2827 ntBASIC15.57■□□□□ 0.08
NDNQ99608 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.57■□□□□ 0.08
NDNQ99608 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NDNQ99608 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NDNQ99608 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDNQ99608 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDNQ99608 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.56■□□□□ 0.08
NDNQ99608 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDNQ99608 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.56■□□□□ 0.08
NDNQ99608 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NDNQ99608 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NDNQ99608 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.56■□□□□ 0.08
NDNQ99608 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NDNQ99608 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDNQ99608 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDNQ99608 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
NDNQ99608 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDNQ99608 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
NDNQ99608 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDNQ99608 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
NDNQ99608 KRT18P64-201ENST00000434946 1219 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms