Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 PCED1CP-201ENST00000419887 785 ntBASIC14.62□□□□□ -0.07
NR1H4Q96RI1 LINC00265-3P-201ENST00000447588 903 ntBASIC14.62□□□□□ -0.07
NR1H4Q96RI1 TOB2P1-201ENST00000469761 992 ntBASIC14.62□□□□□ -0.07
NR1H4Q96RI1 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 AP002414.4-201ENST00000589764 1148 ntBASIC14.61□□□□□ -0.07
NR1H4Q96RI1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NR1H4Q96RI1 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 SIGLEC16-201ENST00000599858 1437 ntBASIC14.6□□□□□ -0.07
NR1H4Q96RI1 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms