Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX18Q96RF0 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX18Q96RF0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNX18Q96RF0 AP3S2-216ENST00000617003 1561 ntBASIC14.17□□□□□ -0.14
SNX18Q96RF0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX18Q96RF0 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNX18Q96RF0 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX18Q96RF0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNX18Q96RF0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNX18Q96RF0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX18Q96RF0 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX18Q96RF0 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNX18Q96RF0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX18Q96RF0 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX18Q96RF0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNX18Q96RF0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX18Q96RF0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX18Q96RF0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 RARRES2P9-201ENST00000565168 469 ntBASIC14.17□□□□□ -0.14
SNX18Q96RF0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 AC022145.2-201ENST00000598203 171 ntBASIC14.17□□□□□ -0.14
SNX18Q96RF0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNX18Q96RF0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX18Q96RF0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX18Q96RF0 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNX18Q96RF0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX18Q96RF0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.17□□□□□ -0.14
SNX18Q96RF0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX18Q96RF0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SNX18Q96RF0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms