Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 CD99-202ENST00000381180 530 ntTSL 2 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 FOSL1P1-201ENST00000511041 816 ntBASIC11.79□□□□□ -0.52
AP1S3Q96PC3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC11.79□□□□□ -0.52
AP1S3Q96PC3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 AP002008.2-201ENST00000635926 4870 ntBASIC11.79□□□□□ -0.52
AP1S3Q96PC3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
AP1S3Q96PC3 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 AL109954.1-202ENST00000564051 2148 ntBASIC11.78□□□□□ -0.52
AP1S3Q96PC3 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 AC006486.2-201ENST00000624246 2199 ntBASIC11.78□□□□□ -0.52
AP1S3Q96PC3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.78□□□□□ -0.52
AP1S3Q96PC3 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 FGFR3P6-201ENST00000457012 610 ntBASIC11.78□□□□□ -0.52
AP1S3Q96PC3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 AC136632.2-201ENST00000512891 861 ntBASIC11.78□□□□□ -0.52
AP1S3Q96PC3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 MIR3909-201ENST00000579518 119 ntBASIC11.78□□□□□ -0.52
AP1S3Q96PC3 AL365330.1-201ENST00000607459 531 ntBASIC11.78□□□□□ -0.52
AP1S3Q96PC3 MIR1199-201ENST00000621445 119 ntBASIC11.78□□□□□ -0.52
AP1S3Q96PC3 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 HDGFL3-201ENST00000299633 12733 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
AP1S3Q96PC3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms