Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 AC084364.1-201ENST00000551967 1556 ntBASIC14.93□□□□□ -0.02
VPS33AQ96AX1 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS33AQ96AX1 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 TIMM8BP1-201ENST00000452384 211 ntBASIC14.92□□□□□ -0.02
VPS33AQ96AX1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 AC120114.3-201ENST00000611923 658 ntBASIC14.92□□□□□ -0.02
VPS33AQ96AX1 BX640515.1-201ENST00000617215 977 ntBASIC14.92□□□□□ -0.02
VPS33AQ96AX1 FAM197Y3-203ENST00000618346 717 ntBASIC14.92□□□□□ -0.02
VPS33AQ96AX1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS33AQ96AX1 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.91□□□□□ -0.02
VPS33AQ96AX1 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
VPS33AQ96AX1 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms