Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 SLC25A1P1-201ENST00000528351 927 ntBASIC13.78□□□□□ -0.2
RFT1Q96AA3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 AL121894.2-201ENST00000602977 491 ntBASIC13.78□□□□□ -0.2
RFT1Q96AA3 AC099522.2-201ENST00000607001 744 ntBASIC13.78□□□□□ -0.2
RFT1Q96AA3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 AP001282.1-201ENST00000531301 1499 ntBASIC13.78□□□□□ -0.2
RFT1Q96AA3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RFT1Q96AA3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFT1Q96AA3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RFT1Q96AA3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
RFT1Q96AA3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.77□□□□□ -0.21
RFT1Q96AA3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 ZNF259P1-201ENST00000407656 1365 ntBASIC13.77□□□□□ -0.21
RFT1Q96AA3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
RFT1Q96AA3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.77□□□□□ -0.21
RFT1Q96AA3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.77□□□□□ -0.21
RFT1Q96AA3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.77□□□□□ -0.21
RFT1Q96AA3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.77□□□□□ -0.21
RFT1Q96AA3 RNA5SP416-201ENST00000516838 111 ntBASIC13.77□□□□□ -0.21
RFT1Q96AA3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.77□□□□□ -0.21
RFT1Q96AA3 AC112191.1-201ENST00000523689 701 ntBASIC13.77□□□□□ -0.21
RFT1Q96AA3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.77□□□□□ -0.21
RFT1Q96AA3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.77□□□□□ -0.21
RFT1Q96AA3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.77□□□□□ -0.21
RFT1Q96AA3 RARRES2P8-201ENST00000566335 367 ntBASIC13.77□□□□□ -0.21
RFT1Q96AA3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.77□□□□□ -0.21
RFT1Q96AA3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.77□□□□□ -0.21
RFT1Q96AA3 AC120114.3-201ENST00000611923 658 ntBASIC13.77□□□□□ -0.21
RFT1Q96AA3 INTS4P1-203ENST00000641008 3683 ntBASIC13.77□□□□□ -0.21
RFT1Q96AA3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.77□□□□□ -0.21
RFT1Q96AA3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
RFT1Q96AA3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
RFT1Q96AA3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.77□□□□□ -0.21
RFT1Q96AA3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFT1Q96AA3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms