Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 AC009093.7-201ENST00000623853 1223 ntBASIC13.94□□□□□ -0.18
PTP4A1Q93096 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTP4A1Q93096 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTP4A1Q93096 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTP4A1Q93096 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTP4A1Q93096 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTP4A1Q93096 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTP4A1Q93096 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTP4A1Q93096 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTP4A1Q93096 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTP4A1Q93096 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTP4A1Q93096 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTP4A1Q93096 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTP4A1Q93096 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PTP4A1Q93096 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTP4A1Q93096 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTP4A1Q93096 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTP4A1Q93096 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTP4A1Q93096 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PTP4A1Q93096 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTP4A1Q93096 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTP4A1Q93096 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 GHSR-202ENST00000427970 912 ntBASIC13.93□□□□□ -0.18
PTP4A1Q93096 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 RN7SL828P-201ENST00000607615 303 ntBASIC13.93□□□□□ -0.18
PTP4A1Q93096 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTP4A1Q93096 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTP4A1Q93096 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTP4A1Q93096 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTP4A1Q93096 KRT8P12-202ENST00000472924 1397 ntBASIC13.93□□□□□ -0.18
PTP4A1Q93096 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTP4A1Q93096 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTP4A1Q93096 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTP4A1Q93096 CR383656.2-201ENST00000548656 2254 ntBASIC13.93□□□□□ -0.18
PTP4A1Q93096 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTP4A1Q93096 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTP4A1Q93096 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTP4A1Q93096 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.93□□□□□ -0.18
PTP4A1Q93096 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PTP4A1Q93096 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
PTP4A1Q93096 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.92□□□□□ -0.18
PTP4A1Q93096 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTP4A1Q93096 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.92□□□□□ -0.18
PTP4A1Q93096 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTP4A1Q93096 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTP4A1Q93096 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTP4A1Q93096 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.92□□□□□ -0.18
PTP4A1Q93096 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.92□□□□□ -0.18
PTP4A1Q93096 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.92□□□□□ -0.18
PTP4A1Q93096 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.92□□□□□ -0.18
PTP4A1Q93096 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.92□□□□□ -0.18
PTP4A1Q93096 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms