Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPGRQ92834 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.84■□□□□ 0.61
RPGRQ92834 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPGRQ92834 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPGRQ92834 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPGRQ92834 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPGRQ92834 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPGRQ92834 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPGRQ92834 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPGRQ92834 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPGRQ92834 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPGRQ92834 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RPGRQ92834 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPGRQ92834 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPGRQ92834 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPGRQ92834 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC18.84■□□□□ 0.61
RPGRQ92834 MPRIPP1-201ENST00000452433 1089 ntBASIC18.84■□□□□ 0.61
RPGRQ92834 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPGRQ92834 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPGRQ92834 FGFR3P5-201ENST00000564496 886 ntBASIC18.84■□□□□ 0.61
RPGRQ92834 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC18.84■□□□□ 0.61
RPGRQ92834 AC004466.1-201ENST00000599515 1080 ntBASIC18.84■□□□□ 0.61
RPGRQ92834 AC022748.3-201ENST00000621828 275 ntBASIC18.84■□□□□ 0.61
RPGRQ92834 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.84■□□□□ 0.61
RPGRQ92834 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPGRQ92834 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPGRQ92834 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.84■□□□□ 0.61
RPGRQ92834 PCDH8P1-201ENST00000428983 2773 ntBASIC18.84■□□□□ 0.61
RPGRQ92834 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RPGRQ92834 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPGRQ92834 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RPGRQ92834 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPGRQ92834 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPGRQ92834 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPGRQ92834 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.84■□□□□ 0.61
RPGRQ92834 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RPGRQ92834 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPGRQ92834 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC18.83■□□□□ 0.61
RPGRQ92834 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPGRQ92834 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.83■□□□□ 0.61
RPGRQ92834 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.83■□□□□ 0.61
RPGRQ92834 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
RPGRQ92834 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RPGRQ92834 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPGRQ92834 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPGRQ92834 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RPGRQ92834 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPGRQ92834 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RPGRQ92834 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RPGRQ92834 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.83■□□□□ 0.61
RPGRQ92834 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPGRQ92834 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPGRQ92834 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPGRQ92834 AC091046.1-201ENST00000331871 207 ntBASIC18.83■□□□□ 0.6
RPGRQ92834 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPGRQ92834 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RPGRQ92834 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPGRQ92834 GHSR-202ENST00000427970 912 ntBASIC18.83■□□□□ 0.6
RPGRQ92834 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.83■□□□□ 0.6
RPGRQ92834 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC18.83■□□□□ 0.6
RPGRQ92834 RNMTL1P1-201ENST00000454103 560 ntBASIC18.83■□□□□ 0.6
RPGRQ92834 MIR4706-201ENST00000582134 82 ntBASIC18.83■□□□□ 0.6
RPGRQ92834 AL645939.5-201ENST00000606834 243 ntBASIC18.83■□□□□ 0.6
RPGRQ92834 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
RPGRQ92834 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
RPGRQ92834 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPGRQ92834 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.83■□□□□ 0.6
RPGRQ92834 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPGRQ92834 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RPGRQ92834 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.83■□□□□ 0.6
RPGRQ92834 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RPGRQ92834 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPGRQ92834 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPGRQ92834 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.83■□□□□ 0.6
RPGRQ92834 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPGRQ92834 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC18.83■□□□□ 0.6
RPGRQ92834 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC18.83■□□□□ 0.6
RPGRQ92834 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.83■□□□□ 0.6
RPGRQ92834 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPGRQ92834 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPGRQ92834 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPGRQ92834 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.83■□□□□ 0.6
RPGRQ92834 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPGRQ92834 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPGRQ92834 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
RPGRQ92834 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.82■□□□□ 0.6
RPGRQ92834 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPGRQ92834 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPGRQ92834 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.82■□□□□ 0.6
RPGRQ92834 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPGRQ92834 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC18.82■□□□□ 0.6
RPGRQ92834 DPM3-202ENST00000368399 517 ntBASIC18.82■□□□□ 0.6
RPGRQ92834 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RPGRQ92834 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPGRQ92834 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPGRQ92834 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
RPGRQ92834 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC18.82■□□□□ 0.6
RPGRQ92834 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC18.82■□□□□ 0.6
RPGRQ92834 TMEM198B-204ENST00000484016 896 ntBASIC18.82■□□□□ 0.6
RPGRQ92834 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms