Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AL512343.1-201ENST00000605837 169 ntBASIC14.66□□□□□ -0.06
TM9SF4Q92544 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.66□□□□□ -0.06
TM9SF4Q92544 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.66□□□□□ -0.06
TM9SF4Q92544 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF4Q92544 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF4Q92544 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF4Q92544 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF4Q92544 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF4Q92544 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
TM9SF4Q92544 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF4Q92544 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TM9SF4Q92544 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.65□□□□□ -0.06
TM9SF4Q92544 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 HIST3H2BA-201ENST00000436555 524 ntBASIC14.65□□□□□ -0.06
TM9SF4Q92544 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 AC020658.6-201ENST00000623564 1870 ntBASIC14.65□□□□□ -0.06
TM9SF4Q92544 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF4Q92544 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.65□□□□□ -0.06
TM9SF4Q92544 AL009178.2-201ENST00000597278 2719 ntBASIC14.65□□□□□ -0.07
TM9SF4Q92544 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF4Q92544 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF4Q92544 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF4Q92544 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF4Q92544 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF4Q92544 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF4Q92544 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF4Q92544 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF4Q92544 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 AC098850.1-201ENST00000419919 790 ntBASIC14.64□□□□□ -0.07
TM9SF4Q92544 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TM9SF4Q92544 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF4Q92544 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms