Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.43■□□□□ 0.22
DDX1Q92499 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DDX1Q92499 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DDX1Q92499 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DDX1Q92499 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DDX1Q92499 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
DDX1Q92499 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
DDX1Q92499 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DDX1Q92499 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DDX1Q92499 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DDX1Q92499 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DDX1Q92499 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
DDX1Q92499 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DDX1Q92499 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
DDX1Q92499 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DDX1Q92499 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DDX1Q92499 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DDX1Q92499 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
DDX1Q92499 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
DDX1Q92499 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.42■□□□□ 0.22
DDX1Q92499 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DDX1Q92499 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.42■□□□□ 0.22
DDX1Q92499 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DDX1Q92499 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
DDX1Q92499 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DDX1Q92499 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DDX1Q92499 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DDX1Q92499 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
DDX1Q92499 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DDX1Q92499 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DDX1Q92499 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DDX1Q92499 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.42■□□□□ 0.22
DDX1Q92499 AC022210.1-201ENST00000449856 793 ntBASIC16.42■□□□□ 0.22
DDX1Q92499 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DDX1Q92499 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.42■□□□□ 0.22
DDX1Q92499 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DDX1Q92499 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DDX1Q92499 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DDX1Q92499 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.42■□□□□ 0.22
DDX1Q92499 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.42■□□□□ 0.22
DDX1Q92499 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
DDX1Q92499 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
DDX1Q92499 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
DDX1Q92499 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DDX1Q92499 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
DDX1Q92499 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
DDX1Q92499 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DDX1Q92499 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DDX1Q92499 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DDX1Q92499 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
DDX1Q92499 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
DDX1Q92499 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DDX1Q92499 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DDX1Q92499 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.41■□□□□ 0.22
DDX1Q92499 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DDX1Q92499 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DDX1Q92499 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DDX1Q92499 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.41■□□□□ 0.22
DDX1Q92499 FGD5P1-202ENST00000614866 2498 ntBASIC16.41■□□□□ 0.22
DDX1Q92499 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DDX1Q92499 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DDX1Q92499 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DDX1Q92499 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DDX1Q92499 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DDX1Q92499 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DDX1Q92499 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DDX1Q92499 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.41■□□□□ 0.22
DDX1Q92499 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DDX1Q92499 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
DDX1Q92499 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DDX1Q92499 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
DDX1Q92499 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
DDX1Q92499 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DDX1Q92499 AC112492.5-201ENST00000421897 457 ntBASIC16.41■□□□□ 0.22
DDX1Q92499 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.41■□□□□ 0.22
DDX1Q92499 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
DDX1Q92499 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.41■□□□□ 0.22
DDX1Q92499 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.41■□□□□ 0.22
DDX1Q92499 AP005482.1-201ENST00000563722 1273 ntBASIC16.41■□□□□ 0.22
DDX1Q92499 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.41■□□□□ 0.22
DDX1Q92499 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.41■□□□□ 0.22
DDX1Q92499 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.41■□□□□ 0.22
DDX1Q92499 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.41■□□□□ 0.22
DDX1Q92499 AC068587.10-201ENST00000641210 219 ntBASIC16.41■□□□□ 0.22
DDX1Q92499 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DDX1Q92499 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.41■□□□□ 0.22
DDX1Q92499 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.41■□□□□ 0.22
DDX1Q92499 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.41■□□□□ 0.22
DDX1Q92499 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DDX1Q92499 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
DDX1Q92499 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DDX1Q92499 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
DDX1Q92499 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DDX1Q92499 AC012508.2-201ENST00000567613 1472 ntBASIC16.41■□□□□ 0.22
DDX1Q92499 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
DDX1Q92499 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DDX1Q92499 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.41■□□□□ 0.22
DDX1Q92499 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DDX1Q92499 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.41■□□□□ 0.22
DDX1Q92499 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms