Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKAP2Q8WWK9 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
CKAP2Q8WWK9 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
CKAP2Q8WWK9 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 C8orf49-201ENST00000525043 1968 ntBASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 AC018712.1-201ENST00000455767 687 ntBASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 AL121894.2-201ENST00000602977 491 ntBASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 AC023141.13-201ENST00000604991 943 ntBASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 AC007064.4-201ENST00000637740 555 ntBASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 CICP20-201ENST00000443330 2801 ntBASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CKAP2Q8WWK9 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 AC007326.2-201ENST00000624224 7579 ntBASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 TPT1P11-201ENST00000458482 498 ntBASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms