Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SHROOM3Q8TF72 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SHROOM3Q8TF72 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SHROOM3Q8TF72 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.71■□□□□ 0.1
SHROOM3Q8TF72 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SHROOM3Q8TF72 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
SHROOM3Q8TF72 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SHROOM3Q8TF72 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.71■□□□□ 0.1
SHROOM3Q8TF72 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SHROOM3Q8TF72 AC068587.10-201ENST00000641210 219 ntBASIC15.71■□□□□ 0.1
SHROOM3Q8TF72 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
SHROOM3Q8TF72 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SHROOM3Q8TF72 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
SHROOM3Q8TF72 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 GNRHR2-203ENST00000581100 1187 ntBASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 AC010319.3-201ENST00000597028 470 ntBASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 WFDC1-204ENST00000613603 549 ntBASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHROOM3Q8TF72 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 USP32P1-208ENST00000506594 1164 ntBASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 AC093726.1-201ENST00000608064 963 ntBASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 AL512384.1-201ENST00000406683 331 ntBASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 ELK1P1-201ENST00000485699 580 ntBASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 AC026410.3-201ENST00000514280 936 ntBASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SHROOM3Q8TF72 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.68■□□□□ 0.1
SHROOM3Q8TF72 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SHROOM3Q8TF72 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.68■□□□□ 0.1
SHROOM3Q8TF72 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHROOM3Q8TF72 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHROOM3Q8TF72 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHROOM3Q8TF72 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHROOM3Q8TF72 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHROOM3Q8TF72 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHROOM3Q8TF72 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms