Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 AL512361.1-201ENST00000554200 418 ntBASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 AC051619.7-201ENST00000568314 623 ntBASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 AC093028.1-201ENST00000622998 982 ntBASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP1Q8TDR0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 AC015911.4-201ENST00000588022 1070 ntBASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 AC074044.1-201ENST00000609673 707 ntBASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
TRAF3IP1Q8TDR0 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 LINC02228-204ENST00000642115 2962 ntBASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 AC015922.1-201ENST00000421102 1152 ntBASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 AC010336.2-201ENST00000564226 506 ntBASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 AC015910.1-201ENST00000579400 975 ntBASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms