Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 ACE3P-201ENST00000423435 1973 ntBASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 HNRNPUP1-201ENST00000554987 333 ntBASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 AC120114.3-201ENST00000611923 658 ntBASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 AC148477.8-201ENST00000624298 468 ntBASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 DMBT1P1-203ENST00000636837 4628 ntBASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RAB3IL1Q8TBN0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 AL136982.4-201ENST00000437689 1740 ntBASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 AC009947.1-201ENST00000444350 727 ntBASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 AP001005.1-201ENST00000571755 1248 ntBASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 AL773604.1-201ENST00000617417 272 ntBASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB3IL1Q8TBN0 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RAB3IL1Q8TBN0 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RAB3IL1Q8TBN0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB3IL1Q8TBN0 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.48■□□□□ 0.07
RAB3IL1Q8TBN0 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB3IL1Q8TBN0 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB3IL1Q8TBN0 FOXO1B-201ENST00000504678 1527 ntBASIC15.48■□□□□ 0.07
RAB3IL1Q8TBN0 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms