Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 AP005018.1-201ENST00000525475 301 ntBASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 AP000845.1-201ENST00000581677 2131 ntBASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 AC025181.2-201ENST00000606994 802 ntBASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 AC007431.3-201ENST00000623221 587 ntBASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SMARCC2Q8TAQ2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.08■□□□□ 0.49
SMARCC2Q8TAQ2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.08■□□□□ 0.49
SMARCC2Q8TAQ2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMARCC2Q8TAQ2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMARCC2Q8TAQ2 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMARCC2Q8TAQ2 AC138969.3-201ENST00000546612 1459 ntBASIC18.08■□□□□ 0.49
SMARCC2Q8TAQ2 AC138932.2-201ENST00000548268 1459 ntBASIC18.08■□□□□ 0.49
SMARCC2Q8TAQ2 AC126755.4-201ENST00000549796 1459 ntBASIC18.08■□□□□ 0.49
SMARCC2Q8TAQ2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.08■□□□□ 0.49
SMARCC2Q8TAQ2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMARCC2Q8TAQ2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMARCC2Q8TAQ2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMARCC2Q8TAQ2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.08■□□□□ 0.49
SMARCC2Q8TAQ2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.08■□□□□ 0.49
SMARCC2Q8TAQ2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 KRT18P43-201ENST00000469825 1281 ntBASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 AC000095.1-201ENST00000603208 874 ntBASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 AL358472.5-202ENST00000641448 1267 ntBASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 LINC02228-204ENST00000642115 2962 ntBASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
SMARCC2Q8TAQ2 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 RN7SL692P-201ENST00000464677 288 ntBASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 RARRES2P5-201ENST00000564013 466 ntBASIC18.07■□□□□ 0.48
SMARCC2Q8TAQ2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms