Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.48■□□□□ 0.23
LMO3Q8TAP4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 KRT8P22-201ENST00000562317 1415 ntBASIC16.47■□□□□ 0.23
LMO3Q8TAP4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 AC134915.1-201ENST00000426461 574 ntBASIC16.47■□□□□ 0.23
LMO3Q8TAP4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 ELK1P1-201ENST00000485699 580 ntBASIC16.47■□□□□ 0.23
LMO3Q8TAP4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 SPDYE22P-201ENST00000582158 798 ntBASIC16.47■□□□□ 0.23
LMO3Q8TAP4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
LMO3Q8TAP4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.46■□□□□ 0.23
LMO3Q8TAP4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 CTBP2P3-201ENST00000585629 1255 ntBASIC16.46■□□□□ 0.23
LMO3Q8TAP4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.46■□□□□ 0.23
LMO3Q8TAP4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LMO3Q8TAP4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms