Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SIMC1Q8NDZ2 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 MIR661-201ENST00000384842 89 ntBASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 AL512638.1-201ENST00000457493 794 ntBASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 AC135586.1-201ENST00000539323 574 ntBASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.63□□□□□ -0.07
SIMC1Q8NDZ2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 AC015922.1-201ENST00000421102 1152 ntBASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 GNAQP1-201ENST00000444815 1067 ntBASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 AC104794.3-201ENST00000566840 1248 ntBASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms