Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 AC138466.3-201ENST00000619983 221 ntBASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 AL139384.1-201ENST00000612143 3047 ntBASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 RN7SL163P-201ENST00000583100 276 ntBASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCDC168Q8NDH2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.36
CCDC168Q8NDH2 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCDC168Q8NDH2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCDC168Q8NDH2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.77□□□□□ -0.36
CCDC168Q8NDH2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.77□□□□□ -0.36
CCDC168Q8NDH2 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CCDC168Q8NDH2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC12.77□□□□□ -0.36
CCDC168Q8NDH2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CCDC168Q8NDH2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC12.77□□□□□ -0.36
CCDC168Q8NDH2 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCDC168Q8NDH2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCDC168Q8NDH2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCDC168Q8NDH2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CCDC168Q8NDH2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CCDC168Q8NDH2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCDC168Q8NDH2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.77□□□□□ -0.36
CCDC168Q8NDH2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCDC168Q8NDH2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 AC026320.2-201ENST00000434379 478 ntBASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 AC025262.2-201ENST00000623975 1056 ntBASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 AC141586.5-201ENST00000624546 2050 ntBASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 AC022188.1-201ENST00000620960 1664 ntBASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 KRT8P14-201ENST00000414254 1442 ntBASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 AL627231.1-201ENST00000394467 1125 ntBASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms