Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
XRN1Q8IZH2 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC20.83■□□□□ 0.92
XRN1Q8IZH2 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC20.83■□□□□ 0.92
XRN1Q8IZH2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
XRN1Q8IZH2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
XRN1Q8IZH2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
XRN1Q8IZH2 API5-202ENST00000420461 2009 ntTSL 2 BASIC20.83■□□□□ 0.92
XRN1Q8IZH2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC20.82■□□□□ 0.92
XRN1Q8IZH2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
XRN1Q8IZH2 AC090502.4-201ENST00000551714 1386 ntBASIC20.82■□□□□ 0.92
XRN1Q8IZH2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
XRN1Q8IZH2 MBP-201ENST00000354542 575 ntTSL 2 BASIC20.82■□□□□ 0.92
XRN1Q8IZH2 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
XRN1Q8IZH2 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC20.82■□□□□ 0.92
XRN1Q8IZH2 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC20.82■□□□□ 0.92
XRN1Q8IZH2 AC018463.1-201ENST00000456674 917 ntBASIC20.82■□□□□ 0.92
XRN1Q8IZH2 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
XRN1Q8IZH2 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC20.82■□□□□ 0.92
XRN1Q8IZH2 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC20.82■□□□□ 0.92
XRN1Q8IZH2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
XRN1Q8IZH2 AC092127.1-201ENST00000567093 3455 ntBASIC20.82■□□□□ 0.92
XRN1Q8IZH2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
XRN1Q8IZH2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
XRN1Q8IZH2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC20.82■□□□□ 0.92
XRN1Q8IZH2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
XRN1Q8IZH2 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 HPGD-203ENST00000422112 805 ntTSL 2 BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 AL627422.1-201ENST00000434104 580 ntBASIC20.81■□□□□ 0.92
XRN1Q8IZH2 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 AC131206.1-201ENST00000538078 1211 ntBASIC20.81■□□□□ 0.92
XRN1Q8IZH2 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 AL161773.1-201ENST00000624845 863 ntBASIC20.81■□□□□ 0.92
XRN1Q8IZH2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 STK26-204ENST00000481105 1835 ntTSL 2 BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 MIR1227-201ENST00000408484 88 ntBASIC20.81■□□□□ 0.92
XRN1Q8IZH2 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 ZBED1P1-201ENST00000502364 1930 ntBASIC20.81■□□□□ 0.92
XRN1Q8IZH2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.81■□□□□ 0.92
XRN1Q8IZH2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 AL590440.2-201ENST00000641973 1595 ntBASIC20.8■□□□□ 0.92
XRN1Q8IZH2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 RAN-210ENST00000541630 1475 ntTSL 2 BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 AL022334.2-201ENST00000610000 484 ntBASIC20.8■□□□□ 0.92
XRN1Q8IZH2 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 AC092299.1-201ENST00000632679 757 ntBASIC20.8■□□□□ 0.92
XRN1Q8IZH2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
XRN1Q8IZH2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
XRN1Q8IZH2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC20.79■□□□□ 0.92
XRN1Q8IZH2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.79■□□□□ 0.92
XRN1Q8IZH2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
XRN1Q8IZH2 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
XRN1Q8IZH2 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
XRN1Q8IZH2 AC026320.2-201ENST00000434379 478 ntBASIC20.79■□□□□ 0.92
XRN1Q8IZH2 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
XRN1Q8IZH2 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC20.79■□□□□ 0.92
XRN1Q8IZH2 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC20.79■□□□□ 0.92
XRN1Q8IZH2 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC20.79■□□□□ 0.92
XRN1Q8IZH2 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
XRN1Q8IZH2 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
XRN1Q8IZH2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
XRN1Q8IZH2 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
XRN1Q8IZH2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
XRN1Q8IZH2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
XRN1Q8IZH2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms