Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 AC026954.1-201ENST00000429771 1293 ntBASIC15.74■□□□□ 0.11
CHPFQ8IZ52 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHPFQ8IZ52 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 GNRHR2-203ENST00000581100 1187 ntBASIC15.73■□□□□ 0.11
CHPFQ8IZ52 BX539320.1-201ENST00000623759 877 ntBASIC15.73■□□□□ 0.11
CHPFQ8IZ52 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 AC092384.3-202ENST00000564646 2873 ntBASIC15.73■□□□□ 0.11
CHPFQ8IZ52 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHPFQ8IZ52 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 LINC02447-202ENST00000501888 2146 ntBASIC15.72■□□□□ 0.11
CHPFQ8IZ52 GAPDHP40-201ENST00000505218 1006 ntBASIC15.72■□□□□ 0.11
CHPFQ8IZ52 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 AC025279.2-201ENST00000569730 653 ntBASIC15.72■□□□□ 0.11
CHPFQ8IZ52 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 MIR6869-201ENST00000619434 62 ntBASIC15.72■□□□□ 0.11
CHPFQ8IZ52 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CHPFQ8IZ52 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms