Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 MKNK2P1-201ENST00000437526 628 ntBASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 ALG1L8P-201ENST00000533887 760 ntBASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 C20orf181-201ENST00000623918 480 ntBASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC170Q8IYT3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 AL133267.1-201ENST00000398220 340 ntBASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 SLED1-202ENST00000512051 380 ntBASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 AL133215.2-201ENST00000609242 977 ntBASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 AC018442.1-201ENST00000421439 2061 ntBASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 AC139749.1-202ENST00000617529 3139 ntBASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC170Q8IYT3 REXO1L4P-201ENST00000605109 1937 ntBASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 AC040169.1-201ENST00000565382 521 ntBASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC170Q8IYT3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC170Q8IYT3 AC018529.2-202ENST00000611482 3087 ntBASIC16.61■□□□□ 0.25
CCDC170Q8IYT3 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.61■□□□□ 0.25
CCDC170Q8IYT3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCDC170Q8IYT3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC170Q8IYT3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC170Q8IYT3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms